BLASTX nr result

ID: Papaver23_contig00034998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00034998
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...    72   4e-11
gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...    70   1e-10
gb|AAO00713.1| retrotransposon protein, putative, unclassified [...    68   7e-10
gb|AAP54692.2| retrotransposon protein, putative, unclassified [...    68   7e-10
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    67   2e-09

>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 45/126 (35%), Positives = 65/126 (51%), Gaps = 6/126 (4%)
 Frame = +2

Query: 143 MKILAWNIQGLAKKFSKD--HLVVLIKNQNPDFLFLSETKIDKDRMLAVASSLNYGNHVC 316
           MK+LAWN +GL    S     L  L++   P  LFLSETK D   +  +A  L + N   
Sbjct: 1   MKVLAWNCRGLRSADSPTIPFLGWLVRQCLPQILFLSETKSDSSLISKLAMYLGFPNVAT 60

Query: 317 IDRIGLAGGLLLMWKDGIKCEIQEASNNMIHVVTKIHPAKPEVL----ITFMYGSTYLDN 484
           +D I  AGGL L W + +  +++ +S N  +    I+    E +    +  +YGS YLDN
Sbjct: 61  VDSINNAGGLALFWSNDVNLDLKVSSTN--YFACNINDLVDEDVYIWNLILLYGSPYLDN 118

Query: 485 KKEQWE 502
           + E WE
Sbjct: 119 RGEVWE 124


>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 1936

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/119 (27%), Positives = 59/119 (49%)
 Frame = +2

Query: 143 MKILAWNIQGLAKKFSKDHLVVLIKNQNPDFLFLSETKIDKDRMLAVASSLNYGNHVCID 322
           M  LAWN +GL    +   L  LI+      +FL ET+   ++M  +   L +   V + 
Sbjct: 636 MSCLAWNCRGLGNTATVQDLRALIQKAGSQLVFLCETRQSVEKMSRLRRKLAFRGFVGVS 695

Query: 323 RIGLAGGLLLMWKDGIKCEIQEASNNMIHVVTKIHPAKPEVLITFMYGSTYLDNKKEQW 499
             G +GGL L W + +  ++++ +   I    ++ P +P+  ITF+YG   ++N+   W
Sbjct: 696 SEGKSGGLALYWDESVSVDVKDINKRYIDAYVRLSPDEPQWHITFVYGEPRVENRHRMW 754


>gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1557

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/119 (26%), Positives = 57/119 (47%)
 Frame = +2

Query: 143 MKILAWNIQGLAKKFSKDHLVVLIKNQNPDFLFLSETKIDKDRMLAVASSLNYGNHVCID 322
           M  L+WN +G+    +   L  L+K  +  F+FL ET+   D++  + + L       + 
Sbjct: 434 MNCLSWNCRGIGNATTVQELCALVKEASSQFVFLCETRQPVDKIKRLRNRLGLRGFAGVS 493

Query: 323 RIGLAGGLLLMWKDGIKCEIQEASNNMIHVVTKIHPAKPEVLITFMYGSTYLDNKKEQW 499
             G++GGL L W + +  EI   +   I    ++ P  P    TF+YG   ++N+ + W
Sbjct: 494 SDGMSGGLALFWHESVHVEILNKNERFIDAYIRLSPNDPLWHATFVYGEPRVENRHKMW 552


>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1585

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/119 (26%), Positives = 57/119 (47%)
 Frame = +2

Query: 143 MKILAWNIQGLAKKFSKDHLVVLIKNQNPDFLFLSETKIDKDRMLAVASSLNYGNHVCID 322
           M  L+WN +G+    +   L  L+K  +  F+FL ET+   D++  + + L       + 
Sbjct: 462 MNCLSWNCRGIGNATTVQELCALVKEASSQFVFLCETRQPVDKIKRLRNRLGLRGFAGVS 521

Query: 323 RIGLAGGLLLMWKDGIKCEIQEASNNMIHVVTKIHPAKPEVLITFMYGSTYLDNKKEQW 499
             G++GGL L W + +  EI   +   I    ++ P  P    TF+YG   ++N+ + W
Sbjct: 522 SDGMSGGLALFWHESVHVEILNKNERFIDAYIRLSPNDPLWHATFVYGEPRVENRHKMW 580


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/120 (32%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
 Frame = +2

Query: 143 MKILAWNIQGLAKKFSKDHLVVLIKNQNPDFLFLSETKIDKDRMLAVASSLNYGNHVCID 322
           MK + WN++G   K    H + L+K   PD L L ETK    R       L Y N   I 
Sbjct: 1   MKAIIWNVRGANSKAFLWHALDLVKMHKPDLLILLETKCSSLRADQATKRLGYVNFRIIP 60

Query: 323 RIGLAGGLLLMWKDGIK-CEIQEASNNMIHVVTKIHPAKPEVLITFMYGSTYLDNKKEQW 499
             G  GG+ LMWK  I      +   N  H + K+    PEVL+T M+  + +  + + W
Sbjct: 61  AFGKRGGIWLMWKADIALVHYADYQPNHFHALFKLRSDIPEVLLTGMHAPSVVSERNKYW 120


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