BLASTX nr result

ID: Papaver23_contig00034953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00034953
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308723.1| glutamate-gated kainate-type ion channel rec...   196   1e-48
ref|XP_002324371.1| glutamate-gated kainate-type ion channel rec...   196   2e-48
ref|XP_002324368.1| glutamate-gated kainate-type ion channel rec...   196   2e-48
ref|XP_002324361.1| glutamate-gated kainate-type ion channel rec...   194   8e-48
ref|XP_002324364.1| glutamate-gated kainate-type ion channel rec...   193   1e-47

>ref|XP_002308723.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222854699|gb|EEE92246.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 866

 Score =  196 bits (499), Expect = 1e-48
 Identities = 98/153 (64%), Positives = 121/153 (79%)
 Frame = -3

Query: 459 SSAAIDLIKNVEVQAIIGPMASAQAIHMVPLGSRSQVPIISFSATSPSISLSQNPYFIRT 280
           ++AA+DLIKNVEVQAI+GP  S QA  ++ LG ++QVPIISFSATSPS++  ++ YF+R 
Sbjct: 66  AAAALDLIKNVEVQAILGPNTSMQANFVIDLGEKAQVPIISFSATSPSLTSIRSSYFLRA 125

Query: 279 TLEDSAQVNVIAAVVKAFGWRTVVPLYEDTEYGHGIIPYLVDALQSVNTRVPYRSVFPVS 100
           T  DSAQVN I+A+V+AFGWR  VP+Y D EYG GIIPYL DALQ V+ RVPYRSV   S
Sbjct: 126 TQNDSAQVNAISAIVQAFGWREAVPIYIDNEYGEGIIPYLTDALQEVDARVPYRSVISPS 185

Query: 99  ASDDRIVQELRNLETMQTRVFILHMVSPLGLRI 1
           A+DD+IV+EL  L TMQTRVFI+HM   LG R+
Sbjct: 186 ATDDQIVEELYKLMTMQTRVFIVHMYPSLGTRL 218


>ref|XP_002324371.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222865805|gb|EEF02936.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 883

 Score =  196 bits (497), Expect = 2e-48
 Identities = 97/153 (63%), Positives = 121/153 (79%)
 Frame = -3

Query: 459 SSAAIDLIKNVEVQAIIGPMASAQAIHMVPLGSRSQVPIISFSATSPSISLSQNPYFIRT 280
           ++AA+DLIKNVEVQAIIGP  S QA  ++ LG ++QVPIISFSA+SPS++  ++P+F R 
Sbjct: 55  AAAALDLIKNVEVQAIIGPTTSMQANFVIELGEKAQVPIISFSASSPSLTSIRSPFFFRA 114

Query: 279 TLEDSAQVNVIAAVVKAFGWRTVVPLYEDTEYGHGIIPYLVDALQSVNTRVPYRSVFPVS 100
           T  DS QVN I+A+V+AFGWR VVP+Y D EYG G+IPYL DALQ+V+ RVPYRSV   S
Sbjct: 115 TQNDSTQVNAISALVQAFGWREVVPIYIDNEYGEGVIPYLTDALQAVDARVPYRSVISPS 174

Query: 99  ASDDRIVQELRNLETMQTRVFILHMVSPLGLRI 1
           A+DD+IV EL  L TMQTRVFI+HM   LG R+
Sbjct: 175 ATDDQIVSELYKLMTMQTRVFIVHMFPSLGARV 207


>ref|XP_002324368.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222865802|gb|EEF02933.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 885

 Score =  196 bits (497), Expect = 2e-48
 Identities = 97/153 (63%), Positives = 121/153 (79%)
 Frame = -3

Query: 459 SSAAIDLIKNVEVQAIIGPMASAQAIHMVPLGSRSQVPIISFSATSPSISLSQNPYFIRT 280
           ++AA+DLIKNVEVQAIIGP  S QA  ++ LG ++QVPIISFSA+SPS++  ++P+F R 
Sbjct: 57  AAAALDLIKNVEVQAIIGPTTSMQANFVIELGEKAQVPIISFSASSPSLTSIRSPFFFRA 116

Query: 279 TLEDSAQVNVIAAVVKAFGWRTVVPLYEDTEYGHGIIPYLVDALQSVNTRVPYRSVFPVS 100
           T  DS QVN I+A+V+AFGWR VVP+Y D EYG G+IPYL DALQ+V+ RVPYRSV   S
Sbjct: 117 TQNDSTQVNAISALVQAFGWREVVPIYIDNEYGEGVIPYLTDALQAVDARVPYRSVISPS 176

Query: 99  ASDDRIVQELRNLETMQTRVFILHMVSPLGLRI 1
           A+DD+IV EL  L TMQTRVFI+HM   LG R+
Sbjct: 177 ATDDQIVSELYKLMTMQTRVFIVHMFPSLGARV 209


>ref|XP_002324361.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222865795|gb|EEF02926.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 856

 Score =  194 bits (492), Expect = 8e-48
 Identities = 96/153 (62%), Positives = 121/153 (79%)
 Frame = -3

Query: 459 SSAAIDLIKNVEVQAIIGPMASAQAIHMVPLGSRSQVPIISFSATSPSISLSQNPYFIRT 280
           ++AA+DLIKNVEVQAIIGP +S QA  ++ LG ++QVPIISFSA+SPS++  ++PYF R 
Sbjct: 88  AAAALDLIKNVEVQAIIGPTSSMQAKFVIELGEKAQVPIISFSASSPSLTSIRSPYFFRA 147

Query: 279 TLEDSAQVNVIAAVVKAFGWRTVVPLYEDTEYGHGIIPYLVDALQSVNTRVPYRSVFPVS 100
           T  DS QVN I A+V+AFGWR  VP+Y D EYG GIIPYL +ALQ+V+ RVPY+SV   S
Sbjct: 148 TQNDSTQVNAITALVQAFGWRAAVPIYIDNEYGEGIIPYLTEALQAVDARVPYQSVISPS 207

Query: 99  ASDDRIVQELRNLETMQTRVFILHMVSPLGLRI 1
           A+DD+IV+EL  L TMQTRVFI+HM   LG R+
Sbjct: 208 ATDDQIVKELYKLMTMQTRVFIVHMYQSLGTRL 240


>ref|XP_002324364.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222865798|gb|EEF02929.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 869

 Score =  193 bits (491), Expect = 1e-47
 Identities = 95/153 (62%), Positives = 120/153 (78%)
 Frame = -3

Query: 459 SSAAIDLIKNVEVQAIIGPMASAQAIHMVPLGSRSQVPIISFSATSPSISLSQNPYFIRT 280
           ++AA+DLIKNVEVQAIIGP  S QA  ++ LG ++QVPI+SFSA+SPS++  ++P+F R 
Sbjct: 55  AAAALDLIKNVEVQAIIGPTTSMQANFVIELGDKAQVPILSFSASSPSLTSIRSPFFFRA 114

Query: 279 TLEDSAQVNVIAAVVKAFGWRTVVPLYEDTEYGHGIIPYLVDALQSVNTRVPYRSVFPVS 100
           T  DS QVN I+A+V+AFGWR  VP+Y D EYG G+IPYL DALQ+V+ RVPYRSV   S
Sbjct: 115 TQNDSTQVNAISALVQAFGWREAVPIYIDNEYGQGVIPYLTDALQAVDARVPYRSVISPS 174

Query: 99  ASDDRIVQELRNLETMQTRVFILHMVSPLGLRI 1
           A+DD+IV EL  L TMQTRVFI+HM   LG R+
Sbjct: 175 ATDDQIVSELYKLMTMQTRVFIVHMFPSLGARV 207


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