BLASTX nr result

ID: Papaver23_contig00034930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00034930
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280516.1| PREDICTED: pentatricopeptide repeat-containi...    87   1e-15
emb|CAN81324.1| hypothetical protein VITISV_041843 [Vitis vinifera]    85   7e-15
ref|XP_002515341.1| pentatricopeptide repeat-containing protein,...    83   2e-14
gb|ABK25792.1| unknown [Picea sitchensis]                              80   2e-13
ref|XP_002330763.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12

>ref|XP_002280516.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g10690-like [Vitis vinifera]
          Length = 609

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 45/80 (56%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
 Frame = -2

Query: 429 HREDCNQLNTSLSSIMRSPPR-VTTSTSIGRVIELLLEKKYKMIIIGRPPYEYDGTSGVY 253
           HREDC +L+  +S++MRSPP  VTT+TSIGRV +L+LEK+YKM+++ +    Y  +   Y
Sbjct: 510 HREDCRELDAPVSTMMRSPPPCVTTTTSIGRVADLILEKRYKMVVVVKYSNLYGSS---Y 566

Query: 252 RSNLRAVGVFTSKQLFNLAV 193
            S+LRAVGVFTS+QLF LA+
Sbjct: 567 SSSLRAVGVFTSEQLFKLAI 586


>emb|CAN81324.1| hypothetical protein VITISV_041843 [Vitis vinifera]
          Length = 1120

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 44/80 (55%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
 Frame = -2

Query: 429 HREDCNQLNTSLSSIMRSPPR-VTTSTSIGRVIELLLEKKYKMIIIGRPPYEYDGTSGVY 253
           H EDC +L+  +S++MRSPP  VTT+TSIGRV +L+LEK+YKM+++ +    Y  +   Y
Sbjct: 484 HHEDCRELDAPVSTMMRSPPPCVTTTTSIGRVADLILEKRYKMVVVVKYSNLYGSS---Y 540

Query: 252 RSNLRAVGVFTSKQLFNLAV 193
            S+LRAVGVFTS+QLF LA+
Sbjct: 541 SSSLRAVGVFTSEQLFKLAM 560


>ref|XP_002515341.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545285|gb|EEF46790.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 600

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 43/98 (43%), Positives = 67/98 (68%), Gaps = 1/98 (1%)
 Frame = -2

Query: 429 HREDCNQLNTSLSSIMRSPPR-VTTSTSIGRVIELLLEKKYKMIIIGRPPYEYDGTSGVY 253
           HREDC +LN +L+++MRSPP  VTT TSIG V++L+L+KKY+M+++     +Y     + 
Sbjct: 503 HREDCTELNATLATMMRSPPPCVTTMTSIGHVVDLILDKKYRMVVV----IKYSNLDSIT 558

Query: 252 RSNLRAVGVFTSKQLFNLAVTESEELEPCIYIQHQHNC 139
            S+ RAVGVFT+++L+ LA   SE     ++++ Q  C
Sbjct: 559 YSSSRAVGVFTAEKLYKLAKPVSE-----LFVREQGFC 591


>gb|ABK25792.1| unknown [Picea sitchensis]
          Length = 324

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 45/83 (54%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
 Frame = -2

Query: 429 HREDCNQLNTSLSSIMRSPPR-VTTSTSIGRVIELLLEKKYKMIIIGRPPYEYDGTSGVY 253
           +REDCN+LN  LSS+MRSPP  VT+ TSIGR I  LLE+KYKMI++ +    YDG  G  
Sbjct: 240 YREDCNELNAQLSSMMRSPPPFVTSCTSIGRAIAFLLEQKYKMIVVVKSESNYDGAFGY- 298

Query: 252 RSNLRAVGVFTSKQLFNLAVTES 184
            S  R VG  TS+ LF+L    S
Sbjct: 299 -SMGRTVGFLTSQHLFSLVCPAS 320


>ref|XP_002330763.1| predicted protein [Populus trichocarpa] gi|222872565|gb|EEF09696.1|
           predicted protein [Populus trichocarpa]
          Length = 242

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
 Frame = -2

Query: 429 HREDCNQLNTSLSSIMRSPPR-VTTSTSIGRVIELLLEKKYKMIIIGRPPYEYDG-TSGV 256
           HREDC +LN  L ++MRSPP  VTT+TSIG V++L+LEK Y+M+++     +Y    S  
Sbjct: 144 HREDCTELNAPLMTMMRSPPPCVTTTTSIGHVVDLILEKMYRMVVV----VKYSNLNSST 199

Query: 255 YRSNLRAVGVFTSKQLFNLAVTESEELE 172
             S  + VGVFT++QLF L V     LE
Sbjct: 200 NSSGSKTVGVFTAEQLFKLVVPVQRPLE 227


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