BLASTX nr result

ID: Papaver23_contig00034915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00034915
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528785.1| RNA binding protein, putative [Ricinus commu...    71   1e-10
emb|CBI29620.3| unnamed protein product [Vitis vinifera]               67   1e-09
ref|XP_002269047.1| PREDICTED: uncharacterized mitochondrial pro...    67   1e-09
ref|XP_004148504.1| PREDICTED: uncharacterized mitochondrial pro...    64   2e-08
ref|XP_004163762.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    62   4e-08

>ref|XP_002528785.1| RNA binding protein, putative [Ricinus communis]
           gi|223531788|gb|EEF33607.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 732

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/50 (68%), Positives = 37/50 (74%)
 Frame = +1

Query: 322 PGQNGGSSIRFLSSMSMQRRLPDLDDPSTLMKEDGVAVCSTMWIENFREP 471
           P  NG +  R LS   M RR PD DDP+TLMKEDGV+VCS MWIENFREP
Sbjct: 36  PRINGFALFRLLSFTPMHRRNPDPDDPATLMKEDGVSVCSQMWIENFREP 85


>emb|CBI29620.3| unnamed protein product [Vitis vinifera]
          Length = 730

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/50 (64%), Positives = 35/50 (70%)
 Frame = +1

Query: 322 PGQNGGSSIRFLSSMSMQRRLPDLDDPSTLMKEDGVAVCSTMWIENFREP 471
           P  NG S  R  S  +  RR PD DDPSTLMKEDGVA+CS MWI+NFR P
Sbjct: 48  PRNNGFSFFRAFSFAAANRRTPDPDDPSTLMKEDGVALCSQMWIDNFRVP 97


>ref|XP_002269047.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Vitis
           vinifera]
          Length = 749

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/50 (64%), Positives = 35/50 (70%)
 Frame = +1

Query: 322 PGQNGGSSIRFLSSMSMQRRLPDLDDPSTLMKEDGVAVCSTMWIENFREP 471
           P  NG S  R  S  +  RR PD DDPSTLMKEDGVA+CS MWI+NFR P
Sbjct: 51  PRNNGFSFFRAFSFAAANRRTPDPDDPSTLMKEDGVALCSQMWIDNFRVP 100


>ref|XP_004148504.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Cucumis sativus]
          Length = 722

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
 Frame = +1

Query: 226 MQKHLVVFGSRIYFSSTKI--TKPILPKLINLGAPGQNGGSSIRFLSSMSMQRRLPDLDD 399
           M + + +F  RI+ SS+ +  +   +   +N      +G    R  S +   RR PD +D
Sbjct: 1   MHRGVFIFAHRIFASSSVVRTSSGFIFSELNPLKSSFHGFPLCRVFSFVPAHRRAPDPND 60

Query: 400 PSTLMKEDGVAVCSTMWIENFREP 471
           PS LMKEDG++ CS MWIENFREP
Sbjct: 61  PSNLMKEDGISACSQMWIENFREP 84


>ref|XP_004163762.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized mitochondrial
           protein ymf11-like [Cucumis sativus]
          Length = 722

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
 Frame = +1

Query: 226 MQKHLVVFGSRIYFSSTKI--TKPILPKLINLGAPGQNGGSSIRFLSSMSMQRRLPDLDD 399
           M + + +F  RI+ SS+ +  +       +N      +G    R  S +   RR PD +D
Sbjct: 1   MHRGVFIFAHRIFASSSVVRTSSGFTFSELNPLKSSFHGFPLCRVFSFVPAHRRAPDPND 60

Query: 400 PSTLMKEDGVAVCSTMWIENFREP 471
           PS LMKEDG++ CS MWIENFREP
Sbjct: 61  PSNLMKEDGISACSQMWIENFREP 84


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