BLASTX nr result

ID: Papaver23_contig00034879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00034879
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF06437.1| ribosomal L28-like protein [Elaeis guineensis]          44   3e-07
gb|ACF06504.1| 60S ribosomal protein L28 [Elaeis guineensis]           39   8e-06

>gb|ACF06437.1| ribosomal L28-like protein [Elaeis guineensis]
          Length = 148

 Score = 43.5 bits (101), Expect(2) = 3e-07
 Identities = 18/21 (85%), Positives = 20/21 (95%)
 Frame = -3

Query: 112 MVQFSKEPNNLYNVNSFRHYG 50
           MVQFSKEPNNLYNVNS++H G
Sbjct: 30  MVQFSKEPNNLYNVNSYKHSG 50



 Score = 35.8 bits (81), Expect(2) = 3e-07
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = -1

Query: 168 EIVRTNNAFLVKEFGNGN 115
           EIV+ NNAFLVK+FGNGN
Sbjct: 11  EIVKRNNAFLVKQFGNGN 28


>gb|ACF06504.1| 60S ribosomal protein L28 [Elaeis guineensis]
          Length = 148

 Score = 38.5 bits (88), Expect(2) = 8e-06
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = -3

Query: 109 VQFSKEPNNLYNVNSFRHYG 50
           VQFSKE NNLYNVNS++H G
Sbjct: 31  VQFSKESNNLYNVNSYKHSG 50



 Score = 35.8 bits (81), Expect(2) = 8e-06
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = -1

Query: 168 EIVRTNNAFLVKEFGNGN 115
           EIV+ NNAFLVK+FGNGN
Sbjct: 11  EIVKRNNAFLVKQFGNGN 28


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