BLASTX nr result

ID: Papaver23_contig00034864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00034864
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...   109   4e-22
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...   107   2e-21
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   105   5e-21
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   103   3e-20
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...   102   4e-20

>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score =  109 bits (272), Expect = 4e-22
 Identities = 63/207 (30%), Positives = 107/207 (51%), Gaps = 6/207 (2%)
 Frame = -2

Query: 606 RNLISDMNLQDLGFKGYPFTWSNQRTDNSRVEERLDRALSNEKWIEVFPKSTVHRLIARG 427
           +NL S ++  ++ F G  FTW  ++   + + ERLDR +++  W+ +FP + +   I   
Sbjct: 167 QNLFSQVDCTEISFTGQIFTWRKKKDGPNNIHERLDRGVASTSWLMLFPHAFLKHHIFTS 226

Query: 426 SYHGPIILKTNPDWKDGAYPFKYFGGWMAHPDCKNLIM*SWRNSQQGSASFSFAKNLKNV 247
           S H  I L+   + K  A PF++   W    D  +L+  +W     GS  F+F +  K V
Sbjct: 227 SDHCQISLEYLANNKSKAPPFRFEKMWCTRKDYDSLVKRTWCTKFYGSHMFNFVQKCKLV 286

Query: 246 KFSLHRWNKTTFGNIQHNITRIKREIDVLASNTIRCH--TTLK-RLESSLSRWQDIVE-- 82
           K +   WNKT FGNI   + ++   ++ +  N +  H  T+LK + E  L++   ++E  
Sbjct: 287 KINSKEWNKTQFGNIFRQLRQVDERLEEIQRNLLIDHNNTSLKTQQELFLAKRNKLLEYN 346

Query: 81  -NYWKTKSINNIINLGDENTFFFHNAA 4
             YWK K  ++ + LGD N+ F+H  A
Sbjct: 347 TTYWKQKCKSDFMVLGDTNSKFYHTHA 373


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score =  107 bits (267), Expect = 2e-21
 Identities = 64/200 (32%), Positives = 102/200 (51%), Gaps = 1/200 (0%)
 Frame = -2

Query: 609  FRNLISDMNLQDLGFKGYPFTWSNQRTDNSRVEERLDRALSNEKWIEVFPKSTVHRLIAR 430
            FR+ +++ +L+DL FKG  F+W   R     ++ERLDRAL N  W    P + +  L   
Sbjct: 766  FRDFLNNGHLRDLHFKGPGFSWFAMRHGRVFIKERLDRALGNIAWSSSQPNTQILHLPKI 825

Query: 429  GSYHGPIILKTNPDWKDGAYPFKYFGGWMAHPDCKNLIM*SWRNSQQGSASFSFAKNLKN 250
            GS H P++L +NP   +    F++   W  H +  ++I  SW  +  GSA  S+ +NL +
Sbjct: 826  GSDHRPLLLDSNPKMLNKTRLFRFEQMWTTHEEYSDVIQRSWPPAFGGSAMRSWNRNLLS 885

Query: 249  VKFSLHRWNKTTFGNIQHNITRIKREIDVL-ASNTIRCHTTLKRLESSLSRWQDIVENYW 73
               +L  W+K  F N    +  +  +I+ L  SN    H  +  L   +++     E YW
Sbjct: 886  CGKALKMWSKEKFSNPSVQVADLLSDIEKLHQSNPPDAHHQINILTDQVTKLWTQDEMYW 945

Query: 72   KTKSINNIINLGDENTFFFH 13
              +S  N + LGD+N+ FFH
Sbjct: 946  HQRSRVNWLKLGDQNSSFFH 965


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  105 bits (263), Expect = 5e-21
 Identities = 66/210 (31%), Positives = 105/210 (50%), Gaps = 8/210 (3%)
 Frame = -2

Query: 609 FRNLISDMNLQDLGFKGYPFTWSNQRTDNSRVEERLDRALSNEKWIEVFPKSTVHRLIAR 430
           FR +I D  ++DLG+ G  FTW    + ++ + ERLDR L+N++W + FP   V  L   
Sbjct: 161 FREVIDDCAVKDLGYVGNRFTWQRGNSPSTLIRERLDRMLANDEWCDNFPSWEVVHLPRY 220

Query: 429 GSYHGPIILKT--NPDWKDGAYPFKYFGGWMAHPDCKNLIM*SWRNSQQGSASFSFAKNL 256
            S H P++LKT  N  ++ G   FK+   W++  +C  ++  +W     GSA       L
Sbjct: 221 RSDHAPLLLKTGVNDSFRRGNKLFKFEAMWLSKEECGKIVEEAW----NGSAGEDITNRL 276

Query: 255 KNVKFSLHRWNKTTFGNIQHN----ITRIK--REIDVLASNTIRCHTTLKRLESSLSRWQ 94
             V  SL  W   TFGN++      +T +   ++ D  AS   +C    + +   L    
Sbjct: 277 DEVSRSLSTWATKTFGNLKKRKKEALTLLNGLQQRDPDASTLEQC----RIVSGDLDEIH 332

Query: 93  DIVENYWKTKSINNIINLGDENTFFFHNAA 4
            + E+YW  ++  N I  GD+NT +FH+ A
Sbjct: 333 RLEESYWHARARANEIRDGDKNTKYFHHKA 362


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  103 bits (256), Expect = 3e-20
 Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 8/207 (3%)
 Frame = -2

Query: 609  FRNLISDMNLQDLGFKGYPFTWSNQ-RTDNSRVEERLDRALSNEKWIEVFPKSTVHRLIA 433
            FR+ ++D  L DLGF+G  FTW N   +    + ERLDRA++N +W  +FP + V     
Sbjct: 407  FRHALTDCGLDDLGFEGDAFTWRNHSHSQEGYIRERLDRAVANPEWRAMFPAARVINGDP 466

Query: 432  RGSYHGPIILKTNPDWK-----DGAYPFKYFGGWMAHPDCKNLIM*SWRNSQQGSASFSF 268
            R S H P+I++     K     +G   F++   W+     K ++  +W +   G      
Sbjct: 467  RHSDHRPVIIELEGKNKGVRGRNGHNDFRFEAAWLEEEKFKEVVKEAW-DVSAGLQGLPV 525

Query: 267  AKNLKNVKFSLHRWNKTTFGNIQHNITRIKREIDVLASNTIRCHTTLKR--LESSLSRWQ 94
              +L  V   L  W+    G+++  + ++K+E++      I     ++   L   L + +
Sbjct: 526  HASLAGVAAGLSSWSSNVLGDLEKRVKKVKKELETCRRQPISRDQVVREEVLRYRLEKLE 585

Query: 93   DIVENYWKTKSINNIINLGDENTFFFH 13
              V+ YWK ++  N +N GD NT FFH
Sbjct: 586  QQVDIYWKQRAHTNWLNKGDRNTSFFH 612


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score =  102 bits (255), Expect = 4e-20
 Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 7/210 (3%)
 Frame = -2

Query: 609  FRNLISDMNLQDLGFKGYPFTWSNQRTDNSRVEERLDRALSNEKWIEVFPKSTVHRLIAR 430
            FR+ + D  L +  F G+ +TW N+R  ++ V+ERLDR   N   I+ +   + H L++ 
Sbjct: 444  FRHAVEDCGLYEFAFTGFQYTWDNRRKGDANVKERLDRGFGNLALIQQWGGISCHHLVSM 503

Query: 429  GSYHGPIILKTNPDWKDGA-----YPFKYFGGWMAHPDCKNLIM*SWRNSQQGSASFSFA 265
             S H P++ + +P    G        F +   W+ H  C+ ++   W          S  
Sbjct: 504  SSDHCPLLFENDPPMSRGGNWRRKRRFLFEDMWLTHEGCRGVVERQWLFGVN-----SVV 558

Query: 264  KNLKNVKFSLHRWNKTTFGNIQHNITRIKREIDVLASNTIRCHTTLKR--LESSLSRWQD 91
              L+ V   L RWN+ TFG+++  +  ++ E+DVL       +   KR  +E  L    +
Sbjct: 559  GKLEQVAGGLKRWNQETFGSVKKKVASLREELDVLQRQPPTSNIICKRNEVECLLDGVLE 618

Query: 90   IVENYWKTKSINNIINLGDENTFFFHNAAR 1
              E  WK ++  +    GD NT FFH  A+
Sbjct: 619  REELLWKQRARVSWFKCGDRNTQFFHQTAK 648


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