BLASTX nr result

ID: Papaver23_contig00034678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00034678
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317391.1| predicted protein [Populus trichocarpa] gi|2...   264   6e-69
ref|XP_003542971.1| PREDICTED: uncharacterized protein LOC100809...   263   1e-68
ref|XP_002522264.1| replication factor C / DNA polymerase III ga...   259   1e-67
ref|XP_003593819.1| DNA polymerase III subunit gamma/tau [Medica...   259   2e-67
ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793...   258   3e-67

>ref|XP_002317391.1| predicted protein [Populus trichocarpa] gi|222860456|gb|EEE98003.1|
           predicted protein [Populus trichocarpa]
          Length = 1190

 Score =  264 bits (674), Expect = 6e-69
 Identities = 125/164 (76%), Positives = 142/164 (86%), Gaps = 2/164 (1%)
 Frame = -1

Query: 487 FADHGLKRDTDSDFVSEARSGH--KTLRGSHGRHQSLTQKFMPRTFRDLVGQNLVAQALS 314
           +ADH LK D DSD  SEARSG   K  R  +GRHQ+LTQ++MPRTFRDLVGQNL AQALS
Sbjct: 418 YADHLLKNDIDSDLASEARSGEQRKLGRNQNGRHQNLTQRYMPRTFRDLVGQNLAAQALS 477

Query: 313 NAVLKRKIGFLYVFYGPHGTGKTSCARIFARALICQASEHPKPCGVCNSCIAHDLGKSRN 134
           NA ++RK+GFLYVFYGPHGTGKTSCARIF+RAL CQ+ EHPKPCG CNSCI+HD+GKSRN
Sbjct: 478 NAAVRRKVGFLYVFYGPHGTGKTSCARIFSRALNCQSLEHPKPCGYCNSCISHDMGKSRN 537

Query: 133 VREVGPVGNFDFESIMDLLDSMNMSQLQSQYRVFIFDDCDTLPP 2
           +REVGPV NFDF+SI+DLLD+M +SQ  SQYRVFIFDDCDTL P
Sbjct: 538 IREVGPVSNFDFKSIIDLLDNMIISQTPSQYRVFIFDDCDTLAP 581


>ref|XP_003542971.1| PREDICTED: uncharacterized protein LOC100809005 [Glycine max]
          Length = 1101

 Score =  263 bits (672), Expect = 1e-68
 Identities = 125/162 (77%), Positives = 140/162 (86%), Gaps = 2/162 (1%)
 Frame = -1

Query: 487 FADHGLKRDTDSDFVSEARSG-HKTLRGS-HGRHQSLTQKFMPRTFRDLVGQNLVAQALS 314
           F D+  K D DSD  SEARSG  + LRG+ H RHQSLTQK+MP+TFRD++GQNLVAQALS
Sbjct: 418 FGDNLFKHDVDSDLASEARSGDQRKLRGNRHSRHQSLTQKYMPQTFRDMIGQNLVAQALS 477

Query: 313 NAVLKRKIGFLYVFYGPHGTGKTSCARIFARALICQASEHPKPCGVCNSCIAHDLGKSRN 134
           NAV+KRK+G LYVFYGPHGTGKTSCARIFARAL C +SEHPKPCG CN C+AHD+GKSRN
Sbjct: 478 NAVMKRKVGLLYVFYGPHGTGKTSCARIFARALNCNSSEHPKPCGFCNYCVAHDMGKSRN 537

Query: 133 VREVGPVGNFDFESIMDLLDSMNMSQLQSQYRVFIFDDCDTL 8
           +REVGPV NFDFE IMDLLD+M +SQL S YRVFIFDDCDTL
Sbjct: 538 IREVGPVSNFDFEGIMDLLDNMTLSQLPSHYRVFIFDDCDTL 579


>ref|XP_002522264.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223538517|gb|EEF40122.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 1105

 Score =  259 bits (663), Expect = 1e-67
 Identities = 124/162 (76%), Positives = 139/162 (85%), Gaps = 2/162 (1%)
 Frame = -1

Query: 487 FADHGLKRDTDSDFVSEARSG--HKTLRGSHGRHQSLTQKFMPRTFRDLVGQNLVAQALS 314
           +ADH LK D DSD  SEARSG  HK  R  + RHQ+ TQK+MPRTFRDLVGQNLVAQALS
Sbjct: 420 YADHLLKNDVDSDLASEARSGGQHKLRRNHNSRHQNFTQKYMPRTFRDLVGQNLVAQALS 479

Query: 313 NAVLKRKIGFLYVFYGPHGTGKTSCARIFARALICQASEHPKPCGVCNSCIAHDLGKSRN 134
           NAV++RK+G LYVFYGPHGTGKTSCARIFARAL CQ+ EHPKPCG CNSCI+HD+GKSRN
Sbjct: 480 NAVVRRKVGLLYVFYGPHGTGKTSCARIFARALNCQSLEHPKPCGYCNSCISHDMGKSRN 539

Query: 133 VREVGPVGNFDFESIMDLLDSMNMSQLQSQYRVFIFDDCDTL 8
           +REVGPV NFDF +I+DLLD+M +S L SQYRVFIFD CDTL
Sbjct: 540 IREVGPVSNFDFGNIVDLLDNMIISHLPSQYRVFIFDGCDTL 581


>ref|XP_003593819.1| DNA polymerase III subunit gamma/tau [Medicago truncatula]
           gi|355482867|gb|AES64070.1| DNA polymerase III subunit
           gamma/tau [Medicago truncatula]
          Length = 1177

 Score =  259 bits (662), Expect = 2e-67
 Identities = 124/163 (76%), Positives = 140/163 (85%), Gaps = 3/163 (1%)
 Frame = -1

Query: 487 FADHGLKRDTDSDFVSEARSG---HKTLRGSHGRHQSLTQKFMPRTFRDLVGQNLVAQAL 317
           + D+  K+D DSD  SEARSG   +K  R  H RHQSLTQK++PRTFRD+VGQNLVAQAL
Sbjct: 428 YGDNLFKQDIDSDLASEARSGSQHNKLRRNHHSRHQSLTQKYIPRTFRDMVGQNLVAQAL 487

Query: 316 SNAVLKRKIGFLYVFYGPHGTGKTSCARIFARALICQASEHPKPCGVCNSCIAHDLGKSR 137
           SNAV +RK+G LYVFYGPHGTGKTSCARIFARAL C +SEHPKPCG CN CIAHD+GKSR
Sbjct: 488 SNAVSRRKVGLLYVFYGPHGTGKTSCARIFARALNCSSSEHPKPCGFCNYCIAHDMGKSR 547

Query: 136 NVREVGPVGNFDFESIMDLLDSMNMSQLQSQYRVFIFDDCDTL 8
           N+REVGPV NFDFE+IMDLLD+M +SQL SQYRVFIFDDCD+L
Sbjct: 548 NIREVGPVSNFDFENIMDLLDNMIVSQLPSQYRVFIFDDCDSL 590


>ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793832 [Glycine max]
          Length = 1191

 Score =  258 bits (660), Expect = 3e-67
 Identities = 125/162 (77%), Positives = 140/162 (86%), Gaps = 2/162 (1%)
 Frame = -1

Query: 487 FADHGLKRDTDSDFVSEARSG-HKTLRGS-HGRHQSLTQKFMPRTFRDLVGQNLVAQALS 314
           F D+  K D DSD  SEARSG  + LRG+ H RHQSLTQK+MPRTFRD+VGQNLVAQALS
Sbjct: 422 FGDNLFKHDVDSDLASEARSGDQRKLRGNRHSRHQSLTQKYMPRTFRDMVGQNLVAQALS 481

Query: 313 NAVLKRKIGFLYVFYGPHGTGKTSCARIFARALICQASEHPKPCGVCNSCIAHDLGKSRN 134
           NAV+K+K+G LYVFYGPHGTGKTS ARIFARAL C +SEHPKPCG CN C+AHD+GKSRN
Sbjct: 482 NAVMKKKVGLLYVFYGPHGTGKTSSARIFARALNCNSSEHPKPCGFCNYCVAHDMGKSRN 541

Query: 133 VREVGPVGNFDFESIMDLLDSMNMSQLQSQYRVFIFDDCDTL 8
           +REVGPV NFDFESIM+LLD+M +SQL S YRVFIFDDCDTL
Sbjct: 542 IREVGPVSNFDFESIMELLDNMIVSQLPSHYRVFIFDDCDTL 583


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