BLASTX nr result

ID: Papaver23_contig00034598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00034598
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    62   4e-08
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    56   4e-06
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    56   4e-06
ref|XP_002298145.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
 Frame = +3

Query: 198 LVGSCNGLVCLNRYHFSRRESIFICNPVTGEYVNLPNPDPRPDYTAVFGFGFVVHSVTNY 377
           +VGSCNGL+CL+   F+  +S++I NP TG Y  LP     PD   VFGFGF  +  TN 
Sbjct: 123 VVGSCNGLLCLSDSLFN--DSLYIYNPFTGRYKELPKSLQYPDQEVVFGFGF--NPKTN- 177

Query: 378 EYKVV-MIYYR 407
           EYKV+ ++YYR
Sbjct: 178 EYKVIRIVYYR 188


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
 Frame = +3

Query: 198 LVGSCNGLVCLNRYHFSRRESIFICNPVTGEYVNLPNPDPRPDYTAVFGFGFVVHSVTNY 377
           +VGSCNGL+CL+   ++  +S++I NP TG Y  LP     PD   V GFGF   +    
Sbjct: 124 VVGSCNGLLCLSDSLYN--DSLYIYNPFTGCYKELPKSLQYPDQEVVSGFGF---NPKTK 178

Query: 378 EYKVV-MIYYR 407
           EYKV+ ++YYR
Sbjct: 179 EYKVIRIVYYR 189


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 31/77 (40%), Positives = 45/77 (58%)
 Frame = +3

Query: 198 LVGSCNGLVCLNRYHFSRRESIFICNPVTGEYVNLPNPDPRPDYTAVFGFGFVVHSVTNY 377
           +VGSCNGL+CL    F  ++++++ NP T ++  LP     PD   VFGFG+  H +T  
Sbjct: 124 VVGSCNGLLCLADSLF--KDAVYVHNPFTRDFKQLPKSLQYPDQEVVFGFGY--HPMTEV 179

Query: 378 EYKVVMIYYRIIRGIFS 428
              V ++YYR   G FS
Sbjct: 180 YKVVKVVYYRNGYGGFS 196


>ref|XP_002298145.1| predicted protein [Populus trichocarpa] gi|222845403|gb|EEE82950.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 22/54 (40%), Positives = 34/54 (62%)
 Frame = +3

Query: 153 NICCNGASRYNGENVLVGSCNGLVCLNRYHFSRRESIFICNPVTGEYVNLPNPD 314
           N+C +     + +   VGS NGL+CL+    S+   ++ICNP+TGEYV +P P+
Sbjct: 26  NVCRSWRDMISDKGNFVGSSNGLLCLSETEDSKINKLYICNPITGEYVEIPGPE 79


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