BLASTX nr result

ID: Papaver23_contig00034416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00034416
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25619.3| unnamed protein product [Vitis vinifera]               60   4e-07
emb|CBI25617.3| unnamed protein product [Vitis vinifera]               60   4e-07
gb|ACJ02352.1| 60S ribosomal protein L39 [Vernicia fordii] gi|25...    60   4e-07
ref|XP_002869300.1| 60S ribosomal protein L39 [Arabidopsis lyrat...    59   9e-07
gb|AEC10956.1| ribosomal protein L39e [Camellia sinensis]              58   1e-06

>emb|CBI25619.3| unnamed protein product [Vitis vinifera]
          Length = 72

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = +3

Query: 276 MIKKKLAKKMRQNRPIPNWIRMRTDNTI 359
           MIKKKLAKKMRQNRPIP+WIRMRTDNTI
Sbjct: 29  MIKKKLAKKMRQNRPIPHWIRMRTDNTI 56


>emb|CBI25617.3| unnamed protein product [Vitis vinifera]
          Length = 70

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = +3

Query: 276 MIKKKLAKKMRQNRPIPNWIRMRTDNTI 359
           MIKKKLAKKMRQNRPIP+WIRMRTDNTI
Sbjct: 27  MIKKKLAKKMRQNRPIPHWIRMRTDNTI 54


>gb|ACJ02352.1| 60S ribosomal protein L39 [Vernicia fordii]
           gi|257219568|gb|ACV50437.1| 60S ribosomal protein L39
           [Jatropha curcas]
          Length = 51

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = +3

Query: 276 MIKKKLAKKMRQNRPIPNWIRMRTDNTI 359
           MIKKKLAKKMRQNRPIP+WIRMRTDNTI
Sbjct: 8   MIKKKLAKKMRQNRPIPHWIRMRTDNTI 35


>ref|XP_002869300.1| 60S ribosomal protein L39 [Arabidopsis lyrata subsp. lyrata]
           gi|297821901|ref|XP_002878833.1| 60S ribosomal protein
           L39 [Arabidopsis lyrata subsp. lyrata]
           gi|297315136|gb|EFH45559.1| 60S ribosomal protein L39
           [Arabidopsis lyrata subsp. lyrata]
           gi|297324672|gb|EFH55092.1| 60S ribosomal protein L39
           [Arabidopsis lyrata subsp. lyrata]
          Length = 51

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = +3

Query: 276 MIKKKLAKKMRQNRPIPNWIRMRTDNTI 359
           MIKKKLAKKMRQNRPIP+WIR+RTDNTI
Sbjct: 8   MIKKKLAKKMRQNRPIPHWIRLRTDNTI 35


>gb|AEC10956.1| ribosomal protein L39e [Camellia sinensis]
          Length = 51

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = +3

Query: 276 MIKKKLAKKMRQNRPIPNWIRMRTDNTI 359
           MIKKKLAKK+RQNRPIP+WIRMRTDNTI
Sbjct: 8   MIKKKLAKKIRQNRPIPHWIRMRTDNTI 35


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