BLASTX nr result

ID: Papaver23_contig00034352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00034352
         (805 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    82   1e-13
ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [S...    81   2e-13
ref|XP_002489257.1| hypothetical protein SORBIDRAFT_0011s003210 ...    79   9e-13
ref|XP_002464795.1| hypothetical protein SORBIDRAFT_01g026845 [S...    75   1e-11
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    75   2e-11

>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 38/118 (32%), Positives = 66/118 (55%)
 Frame = -1

Query: 364 LISWNCQGLGKFDTQNSLLDTLNKENPGILFLSETKQQNKEMLNILKRMNVYNYHLVPPR 185
           ++SWNCQG+G   T   L +      P ++FL ETK++   + N++  +  ++ H V P 
Sbjct: 3   ILSWNCQGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHLGFFDLHTVEPI 62

Query: 184 GIAGGLCLIWNSNANIQILDSAQNHINAMITNHQDDSSWTLTCFYGSPYRKQKLNSWK 11
           G +GGL L+W  +  I++L S +  I+A++     D  + LTC YG P + ++   W+
Sbjct: 63  GKSGGLALMWKDSVQIKVLQSDKRLIDALLI--WQDKEFYLTCIYGEPVQAERGELWE 118


>ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [Sorghum bicolor]
           gi|241921088|gb|EER94232.1| hypothetical protein
           SORBIDRAFT_01g021750 [Sorghum bicolor]
          Length = 426

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
 Frame = -1

Query: 370 ISLISWNCQGLG---KFDTQNSLLDTLNKENPGILFLSETKQQNKEMLNILKRMNVYNYH 200
           ++L+SWNC+G G   +    N L   L      + F+SET+       +++ R N  +  
Sbjct: 1   MTLLSWNCRGSGGSLRSSKMNHLARLLTSTKSQVCFISETRNSTISRTSLINRFNALDAF 60

Query: 199 LVPPRGIAGGLCLIWNSNANIQILDSAQNHINAMITNHQDDSSWTLTCFYGSPYRKQKLN 20
           ++P +G +GGL LIW  + ++ I+D + N+I A+  N+ D+  + L C YG P+     +
Sbjct: 61  IIPAQGQSGGLWLIWKQDFSLTIVDQSPNYIFALCNNNLDNRQFGLICLYGDPHHHNTTS 120

Query: 19  SW 14
            W
Sbjct: 121 IW 122


>ref|XP_002489257.1| hypothetical protein SORBIDRAFT_0011s003210 [Sorghum bicolor]
           gi|241947006|gb|EES20151.1| hypothetical protein
           SORBIDRAFT_0011s003210 [Sorghum bicolor]
          Length = 821

 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 35/123 (28%), Positives = 73/123 (59%), Gaps = 1/123 (0%)
 Frame = -1

Query: 370 ISLISWNCQGLGKFDTQNSLLDTLNKENPGILFLSETKQQNKEMLNILKRMNVYNYHLVP 191
           ++++S NC+G G+ +    +   + ++ P ++FL ET+   ++ L + +R+   N  +V 
Sbjct: 76  MNVLSLNCRGCGRPEAVQEIHQLVVEKKPAVVFLMETRMGEEKALGLARRLGFQNAIVVK 135

Query: 190 PRGIAGGLCLIWNSNANIQILDSAQNHINAMIT-NHQDDSSWTLTCFYGSPYRKQKLNSW 14
             G++GGL L+W+ N  +  L  +++HI+ +++ +H   S W LT FYG P  +++  SW
Sbjct: 136 SEGLSGGLMLMWHGNVMVAELTKSRSHIDVILSCDHLKISHWRLTGFYGEPRWERRRESW 195

Query: 13  KII 5
            ++
Sbjct: 196 YLL 198


>ref|XP_002464795.1| hypothetical protein SORBIDRAFT_01g026845 [Sorghum bicolor]
           gi|241918649|gb|EER91793.1| hypothetical protein
           SORBIDRAFT_01g026845 [Sorghum bicolor]
          Length = 295

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 32/115 (27%), Positives = 66/115 (57%)
 Frame = -1

Query: 370 ISLISWNCQGLGKFDTQNSLLDTLNKENPGILFLSETKQQNKEMLNILKRMNVYNYHLVP 191
           + +++WNC+GL       +LL+   +ENP +LFLSET     ++ N+ +++    + +  
Sbjct: 1   MKILAWNCRGLASHRAVRALLEVQRRENPDVLFLSETHLSKAKVENLKRKVGCEKFAIHE 60

Query: 190 PRGIAGGLCLIWNSNANIQILDSAQNHINAMITNHQDDSSWTLTCFYGSPYRKQK 26
             G +GGL ++W     ++ ++ +Q +I+ ++   +++  W LT  YG PY K++
Sbjct: 61  SDGRSGGLLMLWKKEVVVRPVNISQYYIDVVM---EEEEEWRLTGIYGDPYHKEQ 112


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 4/117 (3%)
 Frame = -1

Query: 364 LISWNCQGLGKFDTQNSLLDTLNKENPGILFLSETKQQNKEMLNILKRMNVYNYHLVPPR 185
           ++SWNC+G+G     ++L   L  ENP I+FLSETK ++ EM ++ K++   +   V   
Sbjct: 4   ILSWNCRGMGSPSALSALRRLLASENPQIVFLSETKLKSYEMESVKKKLKWEHMVAVDCE 63

Query: 184 GIA----GGLCLIWNSNANIQILDSAQNHINAMITNHQDDSSWTLTCFYGSPYRKQK 26
           G      GGL ++W S   +Q++  + NHI+ ++   +    W  T  YG P  + K
Sbjct: 64  GECRKRRGGLAMLWRSEIKVQVMSMSSNHID-IVVGEEAQGEWRFTGIYGYPEEEHK 119


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