BLASTX nr result

ID: Papaver23_contig00034274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00034274
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149513.1| PREDICTED: DNA ligase 4-like [Cucumis sativus]    223   1e-56
emb|CBI17913.3| unnamed protein product [Vitis vinifera]              222   3e-56
ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]     222   3e-56
dbj|BAA97366.1| unnamed protein product [Arabidopsis thaliana]        218   4e-55
ref|NP_568851.2| DNA ligase 4 [Arabidopsis thaliana] gi|75174554...   218   4e-55

>ref|XP_004149513.1| PREDICTED: DNA ligase 4-like [Cucumis sativus]
          Length = 1214

 Score =  223 bits (568), Expect = 1e-56
 Identities = 115/163 (70%), Positives = 130/163 (79%)
 Frame = -3

Query: 490 VKFSVLCSLFNWMQXXXXXXXXXXXXXXFLDNFCKIGDDYFGSIRLILPSLDRERGSYGL 311
           +KF+VL SLF+W+Q              FLD FC     YF +IRLILPSLDRERG+YGL
Sbjct: 5   IKFAVLSSLFDWIQRSKSSAKKRSKFRKFLDTFCS-PSHYFSAIRLILPSLDRERGTYGL 63

Query: 310 KESVLANCLIDAVGLSKDSEDAKKLINWRKGGSKTGYNVGNFGLVAAEVLQRRQGMISGG 131
           KESVLA CLIDA+G+S+DSEDA +LINWRKGG+KTG N GNF LVAAEVLQRRQGM  GG
Sbjct: 64  KESVLATCLIDALGMSRDSEDALRLINWRKGGAKTGANAGNFALVAAEVLQRRQGMTPGG 123

Query: 130 LTIKELNNMLDRLASSENRGDKTAVLADLIQKTNAQEMKWIVM 2
           LTI ELN++LDRLAS ENR +KTAVL+ LIQKTNAQEMKWIVM
Sbjct: 124 LTINELNDLLDRLASGENRAEKTAVLSTLIQKTNAQEMKWIVM 166


>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
          Length = 1163

 Score =  222 bits (565), Expect = 3e-56
 Identities = 115/162 (70%), Positives = 131/162 (80%)
 Frame = -3

Query: 487 KFSVLCSLFNWMQXXXXXXXXXXXXXXFLDNFCKIGDDYFGSIRLILPSLDRERGSYGLK 308
           KFSVLCSLF W+Q              FLD FC I    F +IRLILP+LDRERGSYGLK
Sbjct: 6   KFSVLCSLFTWIQRSRTSAKKRSKFRIFLDTFC-INGHQFSAIRLILPNLDRERGSYGLK 64

Query: 307 ESVLANCLIDAVGLSKDSEDAKKLINWRKGGSKTGYNVGNFGLVAAEVLQRRQGMISGGL 128
           ESVLA CLIDA+G+S++SEDA +LINWRKGG+KTG N GNF +VAAEVLQRRQGM SGGL
Sbjct: 65  ESVLATCLIDALGMSRESEDALRLINWRKGGAKTGANAGNFAMVAAEVLQRRQGMTSGGL 124

Query: 127 TIKELNNMLDRLASSENRGDKTAVLADLIQKTNAQEMKWIVM 2
           TIKELN++LD LASSENR +KT+VL+ LI+KTNAQEMKWIVM
Sbjct: 125 TIKELNDLLDCLASSENRTEKTSVLSTLIKKTNAQEMKWIVM 166


>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
          Length = 1162

 Score =  222 bits (565), Expect = 3e-56
 Identities = 115/162 (70%), Positives = 131/162 (80%)
 Frame = -3

Query: 487 KFSVLCSLFNWMQXXXXXXXXXXXXXXFLDNFCKIGDDYFGSIRLILPSLDRERGSYGLK 308
           KFSVLCSLF W+Q              FLD FC I    F +IRLILP+LDRERGSYGLK
Sbjct: 6   KFSVLCSLFTWIQRSRTSAKKRSKFRIFLDTFC-INGHQFSAIRLILPNLDRERGSYGLK 64

Query: 307 ESVLANCLIDAVGLSKDSEDAKKLINWRKGGSKTGYNVGNFGLVAAEVLQRRQGMISGGL 128
           ESVLA CLIDA+G+S++SEDA +LINWRKGG+KTG N GNF +VAAEVLQRRQGM SGGL
Sbjct: 65  ESVLATCLIDALGMSRESEDALRLINWRKGGAKTGANAGNFAMVAAEVLQRRQGMTSGGL 124

Query: 127 TIKELNNMLDRLASSENRGDKTAVLADLIQKTNAQEMKWIVM 2
           TIKELN++LD LASSENR +KT+VL+ LI+KTNAQEMKWIVM
Sbjct: 125 TIKELNDLLDCLASSENRTEKTSVLSTLIKKTNAQEMKWIVM 166


>dbj|BAA97366.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1184

 Score =  218 bits (555), Expect = 4e-55
 Identities = 111/163 (68%), Positives = 131/163 (80%), Gaps = 1/163 (0%)
 Frame = -3

Query: 490 VKFSVLCSLFNWMQXXXXXXXXXXXXXXFLDNFCKIGDDYFGSIRLILPSLDRERGSYGL 311
           +KFSVL SLFNW+Q              FLD +CK   DYF ++RLI+PSLDRERGSYGL
Sbjct: 5   IKFSVLVSLFNWIQKSKTSSQKRSKFRKFLDTYCK-PSDYFVAVRLIIPSLDRERGSYGL 63

Query: 310 KESVLANCLIDAVGLSKDSEDAKKLINWRKGGS-KTGYNVGNFGLVAAEVLQRRQGMISG 134
           KESVLA CLIDA+G+S+D+ DA +L+NWRKGG+ K G N GNF L+AAEVLQRRQGM SG
Sbjct: 64  KESVLATCLIDALGISRDAPDAVRLLNWRKGGTAKAGANAGNFSLIAAEVLQRRQGMASG 123

Query: 133 GLTIKELNNMLDRLASSENRGDKTAVLADLIQKTNAQEMKWIV 5
           GLTIKELN++LDRLASSENR +KT VL+ LIQKTNAQEMKW++
Sbjct: 124 GLTIKELNDLLDRLASSENRAEKTLVLSTLIQKTNAQEMKWVI 166


>ref|NP_568851.2| DNA ligase 4 [Arabidopsis thaliana]
           gi|75174554|sp|Q9LL84.1|DNLI4_ARATH RecName: Full=DNA
           ligase 4; AltName: Full=DNA ligase IV; AltName:
           Full=Polydeoxyribonucleotide synthase [ATP] 4
           gi|9651815|gb|AAF91284.1|AF233527_1 DNA ligase IV
           [Arabidopsis thaliana] gi|332009474|gb|AED96857.1| DNA
           ligase 4 [Arabidopsis thaliana]
          Length = 1219

 Score =  218 bits (555), Expect = 4e-55
 Identities = 111/163 (68%), Positives = 131/163 (80%), Gaps = 1/163 (0%)
 Frame = -3

Query: 490 VKFSVLCSLFNWMQXXXXXXXXXXXXXXFLDNFCKIGDDYFGSIRLILPSLDRERGSYGL 311
           +KFSVL SLFNW+Q              FLD +CK   DYF ++RLI+PSLDRERGSYGL
Sbjct: 5   IKFSVLVSLFNWIQKSKTSSQKRSKFRKFLDTYCK-PSDYFVAVRLIIPSLDRERGSYGL 63

Query: 310 KESVLANCLIDAVGLSKDSEDAKKLINWRKGGS-KTGYNVGNFGLVAAEVLQRRQGMISG 134
           KESVLA CLIDA+G+S+D+ DA +L+NWRKGG+ K G N GNF L+AAEVLQRRQGM SG
Sbjct: 64  KESVLATCLIDALGISRDAPDAVRLLNWRKGGTAKAGANAGNFSLIAAEVLQRRQGMASG 123

Query: 133 GLTIKELNNMLDRLASSENRGDKTAVLADLIQKTNAQEMKWIV 5
           GLTIKELN++LDRLASSENR +KT VL+ LIQKTNAQEMKW++
Sbjct: 124 GLTIKELNDLLDRLASSENRAEKTLVLSTLIQKTNAQEMKWVI 166


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