BLASTX nr result

ID: Papaver23_contig00034230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00034230
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_194638.1| Ribonuclease H-like protein [Arabidopsis thalia...    57   2e-06
ref|XP_002461669.1| hypothetical protein SORBIDRAFT_02g006163 [S...    55   6e-06
gb|EEC79285.1| hypothetical protein OsI_20087 [Oryza sativa Indi...    55   6e-06

>ref|NP_194638.1| Ribonuclease H-like protein [Arabidopsis thaliana]
           gi|4972055|emb|CAB43923.1| putative protein [Arabidopsis
           thaliana] gi|7269807|emb|CAB79667.1| putative protein
           [Arabidopsis thaliana] gi|67633766|gb|AAY78807.1|
           putative reverse transcriptase/RNA-dependent DNA
           polymerase [Arabidopsis thaliana]
           gi|332660185|gb|AEE85585.1| Ribonuclease H-like protein
           [Arabidopsis thaliana]
          Length = 575

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 24/69 (34%), Positives = 39/69 (56%)
 Frame = -3

Query: 292 PIYKKLWGTSVMHKVQLFIWKCFENILPSKCKLSQYSSHQDTYCNMCNDNHHETTEHIIL 113
           PIY+K+W +    K+Q F+WKC  N LP    L+     +++ C  C  +  ET  H++ 
Sbjct: 252 PIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRC-PSCKETVNHLLF 310

Query: 112 QCSFSRTLW 86
           +C+F+R  W
Sbjct: 311 KCTFARLTW 319


>ref|XP_002461669.1| hypothetical protein SORBIDRAFT_02g006163 [Sorghum bicolor]
            gi|241925046|gb|EER98190.1| hypothetical protein
            SORBIDRAFT_02g006163 [Sorghum bicolor]
          Length = 890

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
 Frame = -3

Query: 283  KKLWGTSVMHKVQLFIWKCFENILPSKCKLSQYSSHQDTYCNMCNDNHHETTEHIILQCS 104
            K+LW T    KV+ F W      L +  + +++   Q   C++C     ET++H++L C 
Sbjct: 748  KELWKTKAPPKVKFFFWLALHGRLWTAARRARHRLQQSASCSLCG-QQDETSDHLLLSCV 806

Query: 103  FSRTLW-ESVSHGNLVLPDFGTNITISNW 20
            FSR  W   +S  NL  P  G++ T+ +W
Sbjct: 807  FSREAWFRLLSFTNLQQPAPGSDDTLVDW 835


>gb|EEC79285.1| hypothetical protein OsI_20087 [Oryza sativa Indica Group]
           gi|218196859|gb|EEC79286.1| hypothetical protein
           OsI_20088 [Oryza sativa Indica Group]
          Length = 216

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 21/71 (29%), Positives = 38/71 (53%)
 Frame = -3

Query: 286 YKKLWGTSVMHKVQLFIWKCFENILPSKCKLSQYSSHQDTYCNMCNDNHHETTEHIILQC 107
           ++K+W   V +K+++F+W+   N LP +C + +     D  C MCN    E   H+ L+C
Sbjct: 108 WEKIWNMEVPNKIKMFVWRLAHNSLPVRCNIRRRGMESDNLCPMCN-RFDEDCGHLFLKC 166

Query: 106 SFSRTLWESVS 74
              +  W S++
Sbjct: 167 KGVKECWRSLN 177


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