BLASTX nr result

ID: Papaver23_contig00034189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00034189
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB46931.2| retrotransposon protein, putative, unclassified [...    73   2e-21
emb|CAN74944.1| hypothetical protein VITISV_000894 [Vitis vinifera]    62   8e-17
emb|CAN71649.1| hypothetical protein VITISV_003282 [Vitis vinifera]    65   3e-16
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    87   2e-15
emb|CAN70669.1| hypothetical protein VITISV_037506 [Vitis vinifera]    59   3e-14

>gb|ABB46931.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1853

 Score = 72.8 bits (177), Expect(2) = 2e-21
 Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 1/141 (0%)
 Frame = -1

Query: 627  EEVDIQATSQSRWVIHAVVTAKFQRS-WILSTIYASTNKANRKRVWNEMHGIGGIQNAEW 451
            E + ++  S +   I A V        W  + +Y      NR R+W  ++ I  + +  W
Sbjct: 729  ESIHVEIISMNERYIDAYVRLSVNAPVWHATFVYGEPRVENRHRMWALLNSIKQVSDLPW 788

Query: 450  MVMGDLNTICSEKEKIGGRKVTASHLEELKSVMDQNGLIDLGAHGPKWTWNNKRVGMANI 271
            +V+GD N    + E    ++ +   ++  + V+ +  L DLG  G  +T++N+R G +N+
Sbjct: 789  LVVGDFNETLWQFEHFSLKQRSELQMQAFRDVVQRCDLHDLGFSGVPYTYDNRREGRSNV 848

Query: 270  KERLDRVMANSMWCNRFPNAQ 208
            K RLDR +A+  W   F  AQ
Sbjct: 849  KVRLDRALADDGWRGLFSTAQ 869



 Score = 55.5 bits (132), Expect(2) = 2e-21
 Identities = 23/66 (34%), Positives = 40/66 (60%)
 Frame = -2

Query: 200  EIFWKQKSRVSWLLEGDLNTKFFHSSTLVRRSRNRIIMLKDNSGCWLESDNAIEQHIVNH 21
            ++ W Q+SR++WL EGD NT+FFH+  + R  +N+I  L+D+      +   +E+    +
Sbjct: 869  QMIWLQRSRIAWLKEGDRNTRFFHNKAVWRAKKNKITKLRDSDDTVHSTTKELERMATEY 928

Query: 20   FCTLFS 3
            F  LF+
Sbjct: 929  FQRLFT 934


>emb|CAN74944.1| hypothetical protein VITISV_000894 [Vitis vinifera]
          Length = 1675

 Score = 62.4 bits (150), Expect(2) = 8e-17
 Identities = 32/80 (40%), Positives = 51/80 (63%)
 Frame = -2

Query: 242  IQCGVTDSRMLRMEEIFWKQKSRVSWLLEGDLNTKFFHSSTLVRRSRNRIIMLKDNSGCW 63
            I+ G  +  +LR EEI WKQK+++ W+ EGD N+K FH     RR++N I +L++  G  
Sbjct: 846  IRKGELEELILR-EEIHWKQKAKIKWVKEGDCNSKLFHKVANGRRNKNFIKILENERGLV 904

Query: 62   LESDNAIEQHIVNHFCTLFS 3
            L+S  +I + I+ +F  L+S
Sbjct: 905  LDSSESITEEILLYFKKLYS 924



 Score = 50.1 bits (118), Expect(2) = 8e-17
 Identities = 25/80 (31%), Positives = 40/80 (50%)
 Frame = -1

Query: 534 IYASTNKANRKRVWNEMHGIGGIQNAEWMVMGDLNTICSEKEKIGGRKVTASHLEELKSV 355
           +Y   N   RK  W E+  + G+    W V GD N I  + EK+GG +VT+S + +    
Sbjct: 731 VYGPNNPPIRKEFWVELSDLFGLTYPSWCVGGDFNVIRRKSEKLGGSRVTSS-MRDFDGF 789

Query: 354 MDQNGLIDLGAHGPKWTWNN 295
           + ++ L D       +TW+N
Sbjct: 790 IRESELHDPPLRNASFTWSN 809


>emb|CAN71649.1| hypothetical protein VITISV_003282 [Vitis vinifera]
          Length = 1021

 Score = 65.1 bits (157), Expect(2) = 3e-16
 Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
 Frame = -1

Query: 549 WILSTIYASTNKANRKRVWNEMHGIGGIQNAEWMVMGDLNTICSEKEKIGGRKVTASHLE 370
           W+   +Y   ++  R+ +W E+  IGG+    W + GD NTI  + E+    ++T S + 
Sbjct: 384 WVFMGVYGPFSREERECLWEEIGAIGGLWEEPWCLGGDFNTILYQSERSRNGRIT-SAMR 442

Query: 369 ELKSVMDQNGLIDLGAHGPKWTWNNKRVGMANIK-ERLDRVMANSMWCNRF 220
               ++D  GL+DL   G  +TW+    G+ N    RLDR +A   W +++
Sbjct: 443 RFAQIIDDLGLVDLPLQGGSFTWSG---GLNNQSWARLDRFLATPSWFDQY 490



 Score = 45.4 bits (106), Expect(2) = 3e-16
 Identities = 25/73 (34%), Positives = 37/73 (50%)
 Frame = -2

Query: 221 SRMLRMEEIFWKQKSRVSWLLEGDLNTKFFHSSTLVRRSRNRIIMLKDNSGCWLESDNAI 42
           ++ + +EE  W+Q SR  WL EGD NT +FH      R  N +  +K N G  L  +  +
Sbjct: 527 AKWVSLEETHWRQLSRELWLREGDRNTGYFHRMANGHRRVNSLDRIKIN-GVRLSEEQEV 585

Query: 41  EQHIVNHFCTLFS 3
            + I N +  L S
Sbjct: 586 REGIANAYQQLLS 598


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 41/113 (36%), Positives = 66/113 (58%)
 Frame = -1

Query: 546 ILSTIYASTNKANRKRVWNEMHGIGGIQNAEWMVMGDLNTICSEKEKIGGRKVTASHLEE 367
           +L+ ++A +  + R + W ++      +   W+V GD+N +    EK+GGR+V     ++
Sbjct: 103 LLTGMHAPSVVSERNKYWVDLTEDSPPRGTPWLVAGDMNEVLHGNEKMGGRQVGKEQGKQ 162

Query: 366 LKSVMDQNGLIDLGAHGPKWTWNNKRVGMANIKERLDRVMANSMWCNRFPNAQ 208
            K  +  N L+DLG  GPK+TW N R G + IKERLDR + NS W + FP+ +
Sbjct: 163 CKDWIAANALLDLGFQGPKFTWTNGRTGGSLIKERLDRALVNSEWLDLFPDTK 215


>emb|CAN70669.1| hypothetical protein VITISV_037506 [Vitis vinifera]
          Length = 2825

 Score = 58.9 bits (141), Expect(2) = 3e-14
 Identities = 27/71 (38%), Positives = 46/71 (64%)
 Frame = -2

Query: 215  MLRMEEIFWKQKSRVSWLLEGDLNTKFFHSSTLVRRSRNRIIMLKDNSGCWLESDNAIEQ 36
            ++  EEI+W+QK+RV W+ EGD N+KF+H     RR+R  I  L++  G  L++  +I +
Sbjct: 839  LILREEIYWRQKARVKWVKEGDCNSKFYHKVANGRRNRKYIKELENERGLVLKNAKSITE 898

Query: 35   HIVNHFCTLFS 3
             I+ +F  L++
Sbjct: 899  EILLYFEKLYA 909



 Score = 44.7 bits (104), Expect(2) = 3e-14
 Identities = 27/85 (31%), Positives = 40/85 (47%)
 Frame = -1

Query: 549 WILSTIYASTNKANRKRVWNEMHGIGGIQNAEWMVMGDLNTICSEKEKIGGRKVTASHLE 370
           WI S IY   + + RK  W E+  I G+    W V  D N I    EK+ G  +T+S + 
Sbjct: 724 WI-SAIYGPNSPSLRKDFWMELFDIYGLTYLLWCVGSDFNVIRRSSEKLEGSSLTSS-MR 781

Query: 369 ELKSVMDQNGLIDLGAHGPKWTWNN 295
           +  S + +  L D       +TW+N
Sbjct: 782 DFDSFIRECELFDPPLRNASFTWSN 806


Top