BLASTX nr result
ID: Papaver23_contig00034177
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00034177
(788 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002873678.1| hypothetical protein ARALYDRAFT_488299 [Arab... 149 2e-37
ref|XP_002524669.1| polyribonucleotide nucleotidyltransferase, p... 158 2e-37
ref|NP_196962.1| polyribonucleotide nucleotidyltransferase [Arab... 148 3e-37
ref|XP_003554809.1| PREDICTED: polyribonucleotide nucleotidyltra... 158 3e-37
ref|XP_002273777.2| PREDICTED: polyribonucleotide nucleotidyltra... 156 7e-37
>ref|XP_002873678.1| hypothetical protein ARALYDRAFT_488299 [Arabidopsis lyrata subsp.
lyrata] gi|297319515|gb|EFH49937.1| hypothetical protein
ARALYDRAFT_488299 [Arabidopsis lyrata subsp. lyrata]
Length = 992
Score = 149 bits (375), Expect(3) = 2e-37
Identities = 76/160 (47%), Positives = 103/160 (64%), Gaps = 7/160 (4%)
Frame = +3
Query: 282 PLNVDYQKKAVFE*EDSWHTIPRRGEAAD-------FVSRPIRPLFASDFNHEVKVNATV 440
PL VDYQ+K + + R G + + RPIRPLF S F HEV++ A+V
Sbjct: 105 PLTVDYQEKQYAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMASV 164
Query: 441 LG*DEQQETDIXXXXXXXXXXXXXDIPWAGTIGVVRVGMIFGDFVINPAMDELKLSDLDL 620
L D +Q+ DI D+PW G IGV+R+G I G FV+NP MDEL SDL+L
Sbjct: 165 LSSDGKQDPDILAANASSAALMLSDVPWGGPIGVIRIGRICGQFVVNPTMDELSSSDLNL 224
Query: 621 VYACTQDKTLMVDLHAQEVSERDLEAALQLAHSEAVKYLE 740
+YACT+DKT+M+D+ ++E+SE+DL AAL+LAH EA+KYL+
Sbjct: 225 IYACTRDKTMMIDVQSREISEKDLAAALRLAHPEAIKYLD 264
Score = 28.1 bits (61), Expect(3) = 2e-37
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +1
Query: 49 TYKEEFEIGSHCITFEAAGGIKESPFGTI----SSVRTTSTFNYKKCGSP 186
++KEEFE+GS ++FE G I G++ + ST K SP
Sbjct: 52 SFKEEFEVGSRVVSFE-TGKIARFANGSVVLGMDQTKVLSTVTCAKTDSP 100
Score = 26.2 bits (56), Expect(3) = 2e-37
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2
Query: 737 RVLDPQRRLASKAGRRK 787
+ LDPQ RLA KAG++K
Sbjct: 261 KYLDPQIRLAEKAGKQK 277
>ref|XP_002524669.1| polyribonucleotide nucleotidyltransferase, putative [Ricinus
communis] gi|223536030|gb|EEF37688.1| polyribonucleotide
nucleotidyltransferase, putative [Ricinus communis]
Length = 958
Score = 158 bits (400), Expect(2) = 2e-37
Identities = 84/165 (50%), Positives = 107/165 (64%), Gaps = 7/165 (4%)
Frame = +3
Query: 267 VSESFPLNVDYQKKAVFE*EDSWHTIPRRGEAAD-------FVSRPIRPLFASDFNHEVK 425
V + PL VDYQ+K + + R G + + RPIRPLFA F HEV+
Sbjct: 102 VRDFLPLTVDYQEKQFAQGVIPNTFMRREGAPKERELLCGRLIDRPIRPLFAPGFYHEVQ 161
Query: 426 VNATVLG*DEQQETDIXXXXXXXXXXXXXDIPWAGTIGVVRVGMIFGDFVINPAMDELKL 605
V A+VL D +Q+ D+ DIPW G IGV+R+G I G F++NP MDEL L
Sbjct: 162 VMASVLSSDGKQDPDVMAANATSAALMLSDIPWGGPIGVIRIGRIGGQFIVNPTMDELSL 221
Query: 606 SDLDLVYACTQDKTLMVDLHAQEVSERDLEAALQLAHSEAVKYLE 740
SDL+LVYACT+DKTLM+D+ A+E+SE+DLEAAL+LAH EAVKYLE
Sbjct: 222 SDLNLVYACTKDKTLMIDVQAREISEKDLEAALRLAHPEAVKYLE 266
Score = 23.9 bits (50), Expect(2) = 2e-37
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 737 RVLDPQRRLASKAGRRK 787
+ L+PQ RLA+KAG+ K
Sbjct: 263 KYLEPQIRLAAKAGKDK 279
>ref|NP_196962.1| polyribonucleotide nucleotidyltransferase [Arabidopsis thaliana]
gi|75336830|sp|Q9S7G6.1|PNP2_ARATH RecName:
Full=Polyribonucleotide nucleotidyltransferase 2,
mitochondrial; Short=AtmtPNPase; AltName:
Full=Polynucleotide phosphorylase 2; Short=PNPase 2;
Flags: Precursor gi|4971998|emb|CAB43864.1|
polynucleotide phosphorylase [Arabidopsis thaliana]
gi|4972000|emb|CAB43865.1| polynucleotide phosphorylase
[Arabidopsis thaliana] gi|7573307|emb|CAB87625.1|
polynucleotide phosphorylase [Arabidopsis thaliana]
gi|332004667|gb|AED92050.1| polyribonucleotide
nucleotidyltransferase [Arabidopsis thaliana]
Length = 991
Score = 148 bits (373), Expect(3) = 3e-37
Identities = 76/160 (47%), Positives = 103/160 (64%), Gaps = 7/160 (4%)
Frame = +3
Query: 282 PLNVDYQKKAVFE*EDSWHTIPRRGEAAD-------FVSRPIRPLFASDFNHEVKVNATV 440
PL VDYQ+K + + R G + + RPIRPLF + F HEV++ A+V
Sbjct: 105 PLTVDYQEKQYAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPTGFYHEVQIMASV 164
Query: 441 LG*DEQQETDIXXXXXXXXXXXXXDIPWAGTIGVVRVGMIFGDFVINPAMDELKLSDLDL 620
L D +Q+ DI D+PW G IGV+R+G I G FV+NP MDEL SDL+L
Sbjct: 165 LSSDGKQDPDILAANASSAALMLSDVPWGGPIGVIRIGRICGQFVVNPTMDELSSSDLNL 224
Query: 621 VYACTQDKTLMVDLHAQEVSERDLEAALQLAHSEAVKYLE 740
+YACT+DKT+M+D+ ++E+SE+DL AAL+LAH EAVKYL+
Sbjct: 225 IYACTRDKTMMIDVQSREISEKDLAAALRLAHPEAVKYLD 264
Score = 28.1 bits (61), Expect(3) = 3e-37
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +1
Query: 49 TYKEEFEIGSHCITFEAAGGIKESPFGTI----SSVRTTSTFNYKKCGSP 186
++KEEFE+GS ++FE G I G++ + ST K SP
Sbjct: 52 SFKEEFEVGSRVVSFE-TGKIARFANGSVVLGMDETKVLSTVTCAKTDSP 100
Score = 26.2 bits (56), Expect(3) = 3e-37
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2
Query: 737 RVLDPQRRLASKAGRRK 787
+ LDPQ RLA KAG++K
Sbjct: 261 KYLDPQIRLAEKAGKQK 277
>ref|XP_003554809.1| PREDICTED: polyribonucleotide nucleotidyltransferase-like [Glycine
max]
Length = 959
Score = 158 bits (399), Expect(2) = 3e-37
Identities = 82/165 (49%), Positives = 107/165 (64%), Gaps = 7/165 (4%)
Frame = +3
Query: 267 VSESFPLNVDYQKKAVFE*EDSWHTIPRRGEAAD-------FVSRPIRPLFASDFNHEVK 425
V + PL VDYQ+K + + R G + + RPIRPLF F HEV+
Sbjct: 82 VRDFLPLTVDYQEKQFAQGVIPTSFMRREGAPRERELLCGRIIDRPIRPLFPPGFYHEVQ 141
Query: 426 VNATVLG*DEQQETDIXXXXXXXXXXXXXDIPWAGTIGVVRVGMIFGDFVINPAMDELKL 605
V A+VL D +Q+TD+ DIPW G IG+VR+G I G F++NP MDELKL
Sbjct: 142 VMASVLSSDGKQDTDVLAANATSAALMLSDIPWGGPIGMVRIGRICGQFIVNPTMDELKL 201
Query: 606 SDLDLVYACTQDKTLMVDLHAQEVSERDLEAALQLAHSEAVKYLE 740
SDL+LVYACT+DKTLM+D+ A+E+S++DLEA L+LAH EAVKY+E
Sbjct: 202 SDLNLVYACTKDKTLMIDVQAREISDKDLEAGLRLAHPEAVKYIE 246
Score = 23.5 bits (49), Expect(2) = 3e-37
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2
Query: 737 RVLDPQRRLASKAGRRK 787
+ ++PQ RLA+KAG+ K
Sbjct: 243 KYIEPQIRLAAKAGKSK 259
>ref|XP_002273777.2| PREDICTED: polyribonucleotide nucleotidyltransferase-like [Vitis
vinifera]
Length = 964
Score = 156 bits (394), Expect(2) = 7e-37
Identities = 81/160 (50%), Positives = 106/160 (66%), Gaps = 7/160 (4%)
Frame = +3
Query: 282 PLNVDYQKKAVFE*EDSWHTIPRRGEAAD-------FVSRPIRPLFASDFNHEVKVNATV 440
PL VDYQ+K + + R G + + RPIRPLF + F HEV+V A+V
Sbjct: 110 PLTVDYQEKHFAQGVIPTTFMRREGAPRERELLCGRLIDRPIRPLFPAGFYHEVQVMASV 169
Query: 441 LG*DEQQETDIXXXXXXXXXXXXXDIPWAGTIGVVRVGMIFGDFVINPAMDELKLSDLDL 620
L D +Q+ D+ DIPW G IGV+R+G I G F++NP+MDEL LSDL+L
Sbjct: 170 LSSDGKQDPDVMAANATSAALMLSDIPWGGPIGVIRIGRICGQFIVNPSMDELSLSDLNL 229
Query: 621 VYACTQDKTLMVDLHAQEVSERDLEAALQLAHSEAVKYLE 740
VYACT+DKTLM+D+ A+E+SE+DLEAAL+LAH EAV+YLE
Sbjct: 230 VYACTRDKTLMIDVQAREISEKDLEAALRLAHPEAVRYLE 269
Score = 24.3 bits (51), Expect(2) = 7e-37
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 737 RVLDPQRRLASKAGRRK 787
R L+PQ RLA++AG+ K
Sbjct: 266 RYLEPQIRLAARAGKSK 282