BLASTX nr result
ID: Papaver23_contig00034102
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00034102
(526 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III s... 71 6e-15
ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III s... 70 3e-14
ref|XP_004135978.1| PREDICTED: DNA-directed RNA polymerase III s... 65 1e-12
ref|XP_002520987.1| DNA-directed RNA polymerase III 25 kD polype... 64 2e-12
ref|NP_001241897.1| uncharacterized protein LOC100800770 [Glycin... 64 5e-12
>ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Vitis
vinifera] gi|297735498|emb|CBI17938.3| unnamed protein
product [Vitis vinifera]
Length = 192
Score = 65.1 bits (157), Expect(2) = 6e-15
Identities = 29/36 (80%), Positives = 33/36 (91%)
Frame = -3
Query: 524 LFVDKVITQLGLCISVYDIKSINGGFIFAGDGASTY 417
LF+DKVI LGLCISVYDI+SI+GGF+F GDGASTY
Sbjct: 33 LFLDKVIANLGLCISVYDIRSIDGGFVFPGDGASTY 68
Score = 40.4 bits (93), Expect(2) = 6e-15
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = -2
Query: 420 LRVSVGFFKDIFVPVHLLPNP 358
LR+S+GFF DI++PVHL+PNP
Sbjct: 97 LRLSLGFFDDIYIPVHLMPNP 117
Score = 71.2 bits (173), Expect = 9e-11
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = -1
Query: 178 WTWMFGDVDLTIEQGDEIRFRIHKISYPPTPLEQETGSRAFAPMVITASIDFDGLGPIS 2
W W + + I+ DEIRF++ +SYPP P+EQ S+ FAPMVI S+D+DGLGP+S
Sbjct: 132 WIWDYQEQKFPIDGIDEIRFQVQSVSYPPIPVEQPKESKPFAPMVIMGSLDYDGLGPVS 190
>ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Vitis
vinifera] gi|296086693|emb|CBI32328.3| unnamed protein
product [Vitis vinifera]
Length = 192
Score = 64.3 bits (155), Expect(2) = 3e-14
Identities = 28/36 (77%), Positives = 33/36 (91%)
Frame = -3
Query: 524 LFVDKVITQLGLCISVYDIKSINGGFIFAGDGASTY 417
LF+DKV+ LGLCISVYDI+SI+GGF+F GDGASTY
Sbjct: 33 LFLDKVLANLGLCISVYDIRSIDGGFVFPGDGASTY 68
Score = 38.9 bits (89), Expect(2) = 3e-14
Identities = 14/21 (66%), Positives = 20/21 (95%)
Frame = -2
Query: 420 LRVSVGFFKDIFVPVHLLPNP 358
L++S+GFF DI++PVHL+PNP
Sbjct: 97 LQLSLGFFDDIYIPVHLMPNP 117
Score = 70.1 bits (170), Expect = 2e-10
Identities = 29/59 (49%), Positives = 41/59 (69%)
Frame = -1
Query: 178 WTWMFGDVDLTIEQGDEIRFRIHKISYPPTPLEQETGSRAFAPMVITASIDFDGLGPIS 2
W W + + I+ DEIRF++ +SYPP P+EQ S+ FAPM+I S+D+DGLGP+S
Sbjct: 132 WIWDYQEQKFPIDGLDEIRFQVQSVSYPPIPVEQPKESKPFAPMMIMGSLDYDGLGPVS 190
>ref|XP_004135978.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
[Cucumis sativus] gi|449523449|ref|XP_004168736.1|
PREDICTED: DNA-directed RNA polymerase III subunit
RPC8-like [Cucumis sativus]
Length = 226
Score = 62.0 bits (149), Expect(2) = 1e-12
Identities = 26/36 (72%), Positives = 32/36 (88%)
Frame = -3
Query: 524 LFVDKVITQLGLCISVYDIKSINGGFIFAGDGASTY 417
LF+DKV+ LGLCISVYDI+S++GGFIF DGA+TY
Sbjct: 33 LFIDKVVANLGLCISVYDIRSVDGGFIFPSDGAATY 68
Score = 35.8 bits (81), Expect(2) = 1e-12
Identities = 14/23 (60%), Positives = 21/23 (91%)
Frame = -2
Query: 420 LRVSVGFFKDIFVPVHLLPNPSK 352
LR+S+GFF+DI+VPV L+P+ S+
Sbjct: 97 LRISLGFFEDIYVPVELMPSGSE 119
Score = 65.1 bits (157), Expect = 6e-09
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 16/76 (21%)
Frame = -1
Query: 181 RWTWMFGDVDLTIEQGDEIRFRIHKISYPPTPLEQETGS----------------RAFAP 50
RW W++ +V I + DEI+F++H I YP +EQ S + FAP
Sbjct: 131 RWVWIYNEVPFDIYESDEIKFKVHSIEYPAILVEQPKESNSKFPMEEKPKESINVKPFAP 190
Query: 49 MVITASIDFDGLGPIS 2
MVITAS+D DGLGP+S
Sbjct: 191 MVITASLDQDGLGPVS 206
>ref|XP_002520987.1| DNA-directed RNA polymerase III 25 kD polypeptide, putative
[Ricinus communis] gi|223539824|gb|EEF41404.1|
DNA-directed RNA polymerase III 25 kD polypeptide,
putative [Ricinus communis]
Length = 194
Score = 61.2 bits (147), Expect(2) = 2e-12
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = -3
Query: 524 LFVDKVITQLGLCISVYDIKSINGGFIFAGDGASTY 417
+F+DKVI LGLCISVYD+ I+GGFIF GDGASTY
Sbjct: 33 IFLDKVIANLGLCISVYDVTHIDGGFIFPGDGASTY 68
Score = 35.8 bits (81), Expect(2) = 2e-12
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = -2
Query: 420 LRVSVGFFKDIFVPVHLLPNPS 355
LR+S+GFF DI++P H LP PS
Sbjct: 97 LRLSLGFFDDIYIPSHRLPKPS 118
Score = 64.3 bits (155), Expect = 1e-08
Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
Frame = -1
Query: 178 WTWMF----GDVDLTIEQGDEIRFRIHKISYPPTPLEQETGSRAFAPMVITASIDFDGLG 11
W W F ++ I+ DEI+FR+ + YPP PLEQ+ + FAPMVIT SID +GLG
Sbjct: 132 WIWEFVSEDNKMEFNIDGLDEIKFRVDSVKYPPVPLEQQ--EKPFAPMVITGSIDDEGLG 189
Query: 10 PIS 2
P+S
Sbjct: 190 PVS 192
>ref|NP_001241897.1| uncharacterized protein LOC100800770 [Glycine max]
gi|255644932|gb|ACU22966.1| unknown [Glycine max]
Length = 214
Score = 63.5 bits (153), Expect(2) = 5e-12
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = -3
Query: 524 LFVDKVITQLGLCISVYDIKSINGGFIFAGDGASTY 417
LF+DKVI LGLCISVYDI+SI+GGFIF GDGA TY
Sbjct: 33 LFLDKVIANLGLCISVYDIRSIDGGFIFPGDGAPTY 68
Score = 32.0 bits (71), Expect(2) = 5e-12
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -2
Query: 420 LRVSVGFFKDIFVPVHLLPNPS 355
LR+++GFF DI++P LP+P+
Sbjct: 97 LRLTIGFFDDIYIPASRLPDPN 118
Score = 64.3 bits (155), Expect = 1e-08
Identities = 27/65 (41%), Positives = 42/65 (64%)
Frame = -1
Query: 196 SDEDGRWTWMFGDVDLTIEQGDEIRFRIHKISYPPTPLEQETGSRAFAPMVITASIDFDG 17
S + G W W + + + I+ D +FR+ +SYP P+EQ S+ FAPM+I+ ++D DG
Sbjct: 140 SSKKGVWYWDYNEQEYPIQDTDVTKFRVTNVSYPQIPVEQPKESKPFAPMLISGAMDDDG 199
Query: 16 LGPIS 2
LGP+S
Sbjct: 200 LGPVS 204