BLASTX nr result
ID: Papaver23_contig00034023
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver23_contig00034023 (494 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAD24831.1| putative non-LTR retroelement reverse transcripta... 157 1e-36 gb|AAD20714.1| putative non-LTR retroelement reverse transcripta... 157 1e-36 emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga... 156 1e-36 emb|CAB75484.1| putative protein [Arabidopsis thaliana] 153 1e-35 gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam... 150 1e-34 >gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1524 Score = 157 bits (396), Expect = 1e-36 Identities = 71/158 (44%), Positives = 105/158 (66%), Gaps = 1/158 (0%) Frame = -2 Query: 493 GMPALFYKKCWEMIGEDVTKTVQDCFNTASLPPGLNHTNLVLIPKVKNPTVPSDYRPLDI 314 G+ A FYK CW+++G DV V+ F T+ + P +NHTN+ +IPK+ NPT SDYRP+ + Sbjct: 606 GLTARFYKNCWDIVGYDVILEVKKFFETSFMKPSINHTNICMIPKITNPTTLSDYRPIAL 665 Query: 313 TNILYKVVTKILAQRLKVHLNELIDTAQSAFIPGRLIIHNIVTTKEIIHSMSHSKSILGV 134 N+LYKV++K L RLK HLN ++ +Q+AFIPGR+I N++ E++HS+ K + Sbjct: 666 CNVLYKVISKCLVNRLKSHLNSIVSDSQAAFIPGRIINDNVMIAHEVMHSLKVRKRVSKT 725 Query: 133 F-ALKIDISKAYDKISWIFLSHCLGIFGIVGKTHDLIM 23 + A+K D+SKAYD++ W FL + +FG K IM Sbjct: 726 YMAVKTDVSKAYDRVEWDFLETTMRLFGFCNKWIGWIM 763 >gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1750 Score = 157 bits (396), Expect = 1e-36 Identities = 71/158 (44%), Positives = 105/158 (66%), Gaps = 1/158 (0%) Frame = -2 Query: 493 GMPALFYKKCWEMIGEDVTKTVQDCFNTASLPPGLNHTNLVLIPKVKNPTVPSDYRPLDI 314 G+ A FYK CW+++G DV V+ F T+ + P +NHTN+ +IPK+ NPT SDYRP+ + Sbjct: 832 GLTARFYKNCWDIVGYDVILEVKKFFETSFMKPSINHTNICMIPKITNPTTLSDYRPIAL 891 Query: 313 TNILYKVVTKILAQRLKVHLNELIDTAQSAFIPGRLIIHNIVTTKEIIHSMSHSKSILGV 134 N+LYKV++K L RLK HLN ++ +Q+AFIPGR+I N++ E++HS+ K + Sbjct: 892 CNVLYKVISKCLVNRLKSHLNSIVSDSQAAFIPGRIINDNVMIAHEVMHSLKVRKRVSKT 951 Query: 133 F-ALKIDISKAYDKISWIFLSHCLGIFGIVGKTHDLIM 23 + A+K D+SKAYD++ W FL + +FG K IM Sbjct: 952 YMAVKTDVSKAYDRVEWDFLETTMRLFGFCNKWIGWIM 989 >emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1355 Score = 156 bits (395), Expect = 1e-36 Identities = 77/165 (46%), Positives = 111/165 (67%), Gaps = 1/165 (0%) Frame = -2 Query: 493 GMPALFYKKCWEMIGEDVTKTVQDCFNTASLPPGLNHTNLVLIPKVKNPTVPSDYRPLDI 314 GM A+FY+K W +IG+DVT+ V + + P +NHTN+ LIPKVKNPT P+++RP+ + Sbjct: 454 GMHAIFYQKFWHIIGDDVTQFVSSILHGSISPSCINHTNIALIPKVKNPTTPAEFRPIAL 513 Query: 313 TNILYKVVTKILAQRLKVHLNELIDTAQSAFIPGRLIIHNIVTTKEIIHSMSH-SKSILG 137 N++YK+V+K L RLK L L+ QSAF+PGRLI N + E+ HSM H ++S G Sbjct: 514 CNVVYKLVSKALVIRLKDFLPRLVSENQSAFVPGRLITDNALIAMEVFHSMKHRNRSRKG 573 Query: 136 VFALKIDISKAYDKISWIFLSHCLGIFGIVGKTHDLIMNYISTES 2 A+K+D+SKAYD++ W FL L G G+ +LIM+ +S+ S Sbjct: 574 TIAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLIMSCVSSVS 618 >emb|CAB75484.1| putative protein [Arabidopsis thaliana] Length = 851 Score = 153 bits (387), Expect = 1e-35 Identities = 69/158 (43%), Positives = 106/158 (67%), Gaps = 1/158 (0%) Frame = -2 Query: 493 GMPALFYKKCWEMIGEDVTKTVQDCFNTASLPPGLNHTNLVLIPKVKNPTVPSDYRPLDI 314 G+ A FYK+CW+++G DV K V+ F ++ + +NHTN+ +IPK++NP SDYRP+ + Sbjct: 71 GLTARFYKQCWDIVGNDVIKEVKLFFESSHMKTSVNHTNICMIPKIQNPQTLSDYRPIAL 130 Query: 313 TNILYKVVTKILAQRLKVHLNELIDTAQSAFIPGRLIIHNIVTTKEIIHSMSHSKSILGV 134 N+LYKV++K + RLK HLN ++ +Q+AFIPGR+I N++ EI+HS+ K + Sbjct: 131 CNVLYKVISKCMVNRLKAHLNSIVSDSQAAFIPGRIINDNVMIAHEIMHSLKVRKRVSKT 190 Query: 133 F-ALKIDISKAYDKISWIFLSHCLGIFGIVGKTHDLIM 23 + A+K D+SKAYD++ W FL + +FG K IM Sbjct: 191 YMAVKTDVSKAYDRVEWDFLETTMRLFGFCDKWIGWIM 228 >gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score: 42.57) [Arabidopsis thaliana] Length = 1662 Score = 150 bits (378), Expect = 1e-34 Identities = 66/148 (44%), Positives = 101/148 (68%), Gaps = 1/148 (0%) Frame = -2 Query: 493 GMPALFYKKCWEMIGEDVTKTVQDCFNTASLPPGLNHTNLVLIPKVKNPTVPSDYRPLDI 314 G+ A FYK CWE++G DV K V+ F T+ + +NHTN+ +IPK+ NP SDYRP+ + Sbjct: 832 GLTARFYKSCWEIVGPDVIKEVKIFFRTSYMKQSINHTNICMIPKITNPETLSDYRPIAL 891 Query: 313 TNILYKVVTKILAQRLKVHLNELIDTAQSAFIPGRLIIHNIVTTKEIIHSMSHSKSI-LG 137 N+LYK+++K L +RLK HL+ ++ +Q+AFIPGRL+ N++ E++HS+ K + Sbjct: 892 CNVLYKIISKCLVERLKGHLDAIVSDSQAAFIPGRLVNDNVMIAHEMMHSLKTRKRVSQS 951 Query: 136 VFALKIDISKAYDKISWIFLSHCLGIFG 53 A+K D+SKAYD++ W FL + +FG Sbjct: 952 YMAVKTDVSKAYDRVEWNFLETTMRLFG 979