BLASTX nr result

ID: Papaver23_contig00033978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00033978
         (808 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305282.1| 4-coumarate-coa ligase [Populus trichocarpa]...    89   1e-15
ref|XP_002985866.1| hypothetical protein SELMODRAFT_446445 [Sela...    67   7e-15
ref|XP_002984802.1| hypothetical protein SELMODRAFT_181279 [Sela...    67   9e-15
ref|XP_002329323.1| 4-coumarate-coa ligase [Populus trichocarpa]...    86   1e-14
ref|XP_003638044.1| 4-coumarate-coa ligase [Medicago truncatula]...    85   2e-14

>ref|XP_002305282.1| 4-coumarate-coa ligase [Populus trichocarpa]
           gi|222848246|gb|EEE85793.1| 4-coumarate-coa ligase
           [Populus trichocarpa]
          Length = 543

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 55/124 (44%), Positives = 70/124 (56%), Gaps = 10/124 (8%)
 Frame = -2

Query: 807 EIWVRGQIVMQGYLNN*KESK----------VGFAQEF**TKTTF*CRPDKEFIKYKETQ 658
           EIWVRG  +M+GY NN + +K           G    F      F     KE IKYK  Q
Sbjct: 390 EIWVRGPNMMRGYFNNPQATKDTMDKKGWVHTGDVGYFDDDGQLFVVDRIKELIKYKGFQ 449

Query: 657 IALFEIERLLVSHPETLHAVAIPYLDSAAGVVPKAYIVRASNSLLNKVDVQKID*STSSP 478
           +A  E+E LLVSHP+ L AV IPY D+ AG VP AY+VR+ NS L +VDVQK      +P
Sbjct: 450 VAPAELEGLLVSHPQILDAVVIPYPDAEAGEVPVAYVVRSPNSALTEVDVQKFIADQVAP 509

Query: 477 MQKI 466
            +++
Sbjct: 510 FKRL 513


>ref|XP_002985866.1| hypothetical protein SELMODRAFT_446445 [Selaginella moellendorffii]
           gi|300146373|gb|EFJ13043.1| hypothetical protein
           SELMODRAFT_446445 [Selaginella moellendorffii]
          Length = 545

 Score = 67.0 bits (162), Expect(2) = 7e-15
 Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
 Frame = -2

Query: 807 EIWVRGQIVMQGYLNN*KES-----KVGFAQE----F**TKTTF*CRPDKEFIKYKETQI 655
           E+W+RGQ +M+GYLNN   +     K G+       +      F     KE IKYK  Q+
Sbjct: 393 ELWLRGQQIMKGYLNNPTATASTIDKNGWLHTGDLVYVNQGRFFVLDRMKELIKYKGFQV 452

Query: 654 ALFEIERLLVSHPETLHAVAIPYLDSAAGVVPKAYIVRASNSLLNKVDV 508
           A  E+E LL+SHP  L A  +P  D  AG VP AY+V+  N+ +++ +V
Sbjct: 453 APAELEALLLSHPSLLDAAVVPLADEEAGQVPIAYVVKKPNATVDESNV 501



 Score = 39.7 bits (91), Expect(2) = 7e-15
 Identities = 19/33 (57%), Positives = 25/33 (75%)
 Frame = -3

Query: 497 IEARVAPCKRLHQVTFFSSVLKSGSGKILRREL 399
           I  +VAP KRL +V+F  ++ KS +GKILRREL
Sbjct: 505 IAKQVAPYKRLRRVSFIDAIPKSAAGKILRREL 537


>ref|XP_002984802.1| hypothetical protein SELMODRAFT_181279 [Selaginella moellendorffii]
           gi|300147388|gb|EFJ14052.1| hypothetical protein
           SELMODRAFT_181279 [Selaginella moellendorffii]
          Length = 545

 Score = 66.6 bits (161), Expect(2) = 9e-15
 Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 9/109 (8%)
 Frame = -2

Query: 807 EIWVRGQIVMQGYLNN*KESKVGFAQE---------F**TKTTF*CRPDKEFIKYKETQI 655
           E+W+RGQ +M+GYLNN   +     +          +      F     KE IKYK  Q+
Sbjct: 393 ELWLRGQQIMKGYLNNPTATASTIDENGWLHTGDLVYVNQGRFFVLDRMKELIKYKGFQV 452

Query: 654 ALFEIERLLVSHPETLHAVAIPYLDSAAGVVPKAYIVRASNSLLNKVDV 508
           A  E+E LL+SHP  L A  +P  D  AG VP AY+V+  N+ +++ +V
Sbjct: 453 APAELEALLLSHPSLLDAAVVPLADEEAGQVPIAYVVKKPNATVDESNV 501



 Score = 39.7 bits (91), Expect(2) = 9e-15
 Identities = 19/33 (57%), Positives = 25/33 (75%)
 Frame = -3

Query: 497 IEARVAPCKRLHQVTFFSSVLKSGSGKILRREL 399
           I  +VAP KRL +V+F  ++ KS +GKILRREL
Sbjct: 505 IAKQVAPYKRLRRVSFIDAIPKSAAGKILRREL 537


>ref|XP_002329323.1| 4-coumarate-coa ligase [Populus trichocarpa]
           gi|224127626|ref|XP_002329324.1| acyl:coa ligase
           [Populus trichocarpa] gi|222870777|gb|EEF07908.1|
           4-coumarate-coa ligase [Populus trichocarpa]
           gi|222870778|gb|EEF07909.1| acyl:coa ligase [Populus
           trichocarpa]
          Length = 543

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 54/124 (43%), Positives = 68/124 (54%), Gaps = 10/124 (8%)
 Frame = -2

Query: 807 EIWVRGQIVMQGYLNN*KESK----------VGFAQEF**TKTTF*CRPDKEFIKYKETQ 658
           EIWVRG  +M+GY NN + +K           G    F      F     KE IKYK  Q
Sbjct: 390 EIWVRGPNMMRGYFNNPQATKDTIDKKGWVHTGDLGYFDDDGQLFVVDRIKELIKYKGFQ 449

Query: 657 IALFEIERLLVSHPETLHAVAIPYLDSAAGVVPKAYIVRASNSLLNKVDVQKID*STSSP 478
           +A  E+E LLVSHPE L AV  PY D+ AG VP AY+VR+ NS L + DVQK      +P
Sbjct: 450 VAPAELEGLLVSHPEILDAVVTPYPDAEAGEVPVAYVVRSPNSALTEEDVQKFISDQVAP 509

Query: 477 MQKI 466
            +++
Sbjct: 510 FKRL 513


>ref|XP_003638044.1| 4-coumarate-coa ligase [Medicago truncatula]
           gi|355503979|gb|AES85182.1| 4-coumarate-coa ligase
           [Medicago truncatula]
          Length = 218

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 52/124 (41%), Positives = 70/124 (56%), Gaps = 10/124 (8%)
 Frame = -2

Query: 807 EIWVRGQIVMQGYLNN*KESKVGFAQE----------F**TKTTF*CRPDKEFIKYKETQ 658
           EIWVRG  +M GY NN + S++   ++          F      F     KE IKYK  Q
Sbjct: 65  EIWVRGPNMMPGYYNNPQASRLTIDKKGWVHTGDLGYFDEDGNLFVVDRIKELIKYKGFQ 124

Query: 657 IALFEIERLLVSHPETLHAVAIPYLDSAAGVVPKAYIVRASNSLLNKVDVQKID*STSSP 478
           +A  E+E LLVSHPE L AV IP+ D+ AG VP AY+VR+ NS L + D+QK      +P
Sbjct: 125 VAPAELEGLLVSHPEILDAVVIPFPDAEAGEVPVAYVVRSPNSSLTEEDIQKFIADQVAP 184

Query: 477 MQKI 466
            +++
Sbjct: 185 FKRL 188


Top