BLASTX nr result

ID: Papaver23_contig00033970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00033970
         (992 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF43043.1|AF236059_1 putative Myb-related domain, partial [P...    72   2e-10
ref|NP_568099.1| myb domain protein 3r-5 [Arabidopsis thaliana] ...    52   3e-06
gb|AAK54740.2|AF371976_1 putative c-myb-like transcription facto...    52   3e-06
emb|CAB85537.1| myb-like protein [Arabidopsis thaliana]                52   3e-06
ref|XP_002873047.1| myb domain protein 3R-5 [Arabidopsis lyrata ...    52   7e-06

>gb|AAF43043.1|AF236059_1 putative Myb-related domain, partial [Papaver rhoeas]
          Length = 566

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 38/66 (57%), Positives = 47/66 (71%), Gaps = 12/66 (18%)
 Frame = +3

Query: 132 VEMTMNIKLRCLENKAR----NSSVSDEEEEDLNCSGLSV--------RRIGGPARRAKG 275
           V++ +++++RCLENK      +SSVSDEEEEDLNCSG S+        RRI GP RRAKG
Sbjct: 31  VDVDVDVEVRCLENKQETPNSSSSVSDEEEEDLNCSGSSLSVRSASSNRRISGPIRRAKG 90

Query: 276 GWTTEE 293
           GWT EE
Sbjct: 91  GWTPEE 96



 Score = 54.7 bits (130), Expect(2) = 2e-08
 Identities = 25/35 (71%), Positives = 29/35 (82%), Gaps = 2/35 (5%)
 Frame = +2

Query: 824 EDDKILEFV--YGPSKWSVKTKEMPGRVGKQC*ER 922
           EDDKI+E V  YGPSKWS+  KE+PGR+GKQC ER
Sbjct: 148 EDDKIMELVSKYGPSKWSLIAKELPGRIGKQCRER 182



 Score = 30.8 bits (68), Expect(2) = 2e-08
 Identities = 14/20 (70%), Positives = 16/20 (80%)
 Frame = +1

Query: 763 QDEKLRKAGESLKEKIWKQI 822
           +DEKLRKA ES K K WK+I
Sbjct: 96  EDEKLRKAVESFKGKNWKKI 115


>ref|NP_568099.1| myb domain protein 3r-5 [Arabidopsis thaliana]
           gi|334187379|ref|NP_001190206.1| myb domain protein 3r-5
           [Arabidopsis thaliana] gi|41619514|gb|AAS10119.1| MYB
           transcription factor [Arabidopsis thaliana]
           gi|332003075|gb|AED90458.1| myb domain protein 3r-5
           [Arabidopsis thaliana] gi|332003076|gb|AED90459.1| myb
           domain protein 3r-5 [Arabidopsis thaliana]
          Length = 548

 Score = 52.4 bits (124), Expect(2) = 3e-06
 Identities = 24/35 (68%), Positives = 28/35 (80%), Gaps = 2/35 (5%)
 Frame = +2

Query: 824 EDDKILEFV--YGPSKWSVKTKEMPGRVGKQC*ER 922
           EDDKI+E V  YGP+KWSV  K +PGR+GKQC ER
Sbjct: 134 EDDKIVELVKKYGPAKWSVIAKSLPGRIGKQCRER 168



 Score = 25.4 bits (54), Expect(2) = 3e-06
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 763 QDEKLRKAGESLKEKIWKQI 822
           +DE LR+A E  K K WK+I
Sbjct: 82  EDETLRRAVEKYKGKRWKKI 101


>gb|AAK54740.2|AF371976_1 putative c-myb-like transcription factor MYB3R-5 [Arabidopsis
           thaliana]
          Length = 548

 Score = 52.4 bits (124), Expect(2) = 3e-06
 Identities = 24/35 (68%), Positives = 28/35 (80%), Gaps = 2/35 (5%)
 Frame = +2

Query: 824 EDDKILEFV--YGPSKWSVKTKEMPGRVGKQC*ER 922
           EDDKI+E V  YGP+KWSV  K +PGR+GKQC ER
Sbjct: 134 EDDKIVELVKKYGPAKWSVIAKSLPGRIGKQCRER 168



 Score = 25.4 bits (54), Expect(2) = 3e-06
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 763 QDEKLRKAGESLKEKIWKQI 822
           +DE LR+A E  K K WK+I
Sbjct: 82  EDETLRRAVEKYKGKRWKKI 101


>emb|CAB85537.1| myb-like protein [Arabidopsis thaliana]
          Length = 529

 Score = 52.4 bits (124), Expect(2) = 3e-06
 Identities = 24/35 (68%), Positives = 28/35 (80%), Gaps = 2/35 (5%)
 Frame = +2

Query: 824 EDDKILEFV--YGPSKWSVKTKEMPGRVGKQC*ER 922
           EDDKI+E V  YGP+KWSV  K +PGR+GKQC ER
Sbjct: 115 EDDKIVELVKKYGPAKWSVIAKSLPGRIGKQCRER 149



 Score = 25.4 bits (54), Expect(2) = 3e-06
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 763 QDEKLRKAGESLKEKIWKQI 822
           +DE LR+A E  K K WK+I
Sbjct: 63  EDETLRRAVEKYKGKRWKKI 82


>ref|XP_002873047.1| myb domain protein 3R-5 [Arabidopsis lyrata subsp. lyrata]
           gi|297318884|gb|EFH49306.1| myb domain protein 3R-5
           [Arabidopsis lyrata subsp. lyrata]
          Length = 541

 Score = 52.4 bits (124), Expect(2) = 7e-06
 Identities = 24/35 (68%), Positives = 28/35 (80%), Gaps = 2/35 (5%)
 Frame = +2

Query: 824 EDDKILEFV--YGPSKWSVKTKEMPGRVGKQC*ER 922
           EDDKI+E V  YGP+KWSV  K +PGR+GKQC ER
Sbjct: 134 EDDKIVELVKKYGPAKWSVIAKSLPGRIGKQCRER 168



 Score = 24.3 bits (51), Expect(2) = 7e-06
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 763 QDEKLRKAGESLKEKIWKQI 822
           +DE LR+A +  K K WK+I
Sbjct: 82  EDETLRRAVDKYKGKRWKKI 101


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