BLASTX nr result

ID: Papaver23_contig00033879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00033879
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532972.1| RNA-binding protein, putative [Ricinus commu...    60   3e-07
ref|XP_002327561.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002305898.1| predicted protein [Populus trichocarpa] gi|2...    59   7e-07
ref|XP_002278861.2| PREDICTED: uncharacterized protein LOC100250...    55   6e-06
emb|CBI33920.3| unnamed protein product [Vitis vinifera]               55   6e-06

>ref|XP_002532972.1| RNA-binding protein, putative [Ricinus communis]
           gi|223527250|gb|EEF29409.1| RNA-binding protein,
           putative [Ricinus communis]
          Length = 962

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 30/52 (57%), Positives = 33/52 (63%)
 Frame = -2

Query: 234 YDSDYGRGGTRDGSCNRHDSPDRVLDKRSSSRERYQQPHKRSERSQYSRHDD 79
           YDSDY RG  RDGS  R DS +R  DKR  SRER Q P +R ERS+    DD
Sbjct: 84  YDSDYERGSRRDGSWRRRDSRERERDKRDLSRERDQSPRRRHERSRSRGRDD 135


>ref|XP_002327561.1| predicted protein [Populus trichocarpa] gi|222836115|gb|EEE74536.1|
           predicted protein [Populus trichocarpa]
          Length = 988

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 28/52 (53%), Positives = 35/52 (67%)
 Frame = -2

Query: 234 YDSDYGRGGTRDGSCNRHDSPDRVLDKRSSSRERYQQPHKRSERSQYSRHDD 79
           YDSDY RG  RDG+  R +S DR  DKR+ S+E+ Q PH+  ERSQ   +DD
Sbjct: 163 YDSDYERGSRRDGNWRRRESHDRECDKRALSQEKSQSPHRWHERSQSRGYDD 214


>ref|XP_002305898.1| predicted protein [Populus trichocarpa] gi|222848862|gb|EEE86409.1|
           predicted protein [Populus trichocarpa]
          Length = 1023

 Score = 58.5 bits (140), Expect = 7e-07
 Identities = 28/52 (53%), Positives = 34/52 (65%)
 Frame = -2

Query: 234 YDSDYGRGGTRDGSCNRHDSPDRVLDKRSSSRERYQQPHKRSERSQYSRHDD 79
           YDSDY RG  RDG+  R  S DR  DKR  S+E+ Q PH+R ERS+   +DD
Sbjct: 155 YDSDYERGSRRDGNWRRRGSHDREHDKRGLSQEKSQSPHRRHERSRSRGYDD 206


>ref|XP_002278861.2| PREDICTED: uncharacterized protein LOC100250662 [Vitis vinifera]
          Length = 1105

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 27/52 (51%), Positives = 33/52 (63%)
 Frame = -2

Query: 234 YDSDYGRGGTRDGSCNRHDSPDRVLDKRSSSRERYQQPHKRSERSQYSRHDD 79
           YDSDY RG  RDG+  R +S DR  DKR  SRER Q P ++ ERS+    +D
Sbjct: 224 YDSDYDRGSRRDGNWRRRESRDRERDKRGLSRERDQSPPRKHERSRSRGRED 275


>emb|CBI33920.3| unnamed protein product [Vitis vinifera]
          Length = 1029

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 27/52 (51%), Positives = 33/52 (63%)
 Frame = -2

Query: 234 YDSDYGRGGTRDGSCNRHDSPDRVLDKRSSSRERYQQPHKRSERSQYSRHDD 79
           YDSDY RG  RDG+  R +S DR  DKR  SRER Q P ++ ERS+    +D
Sbjct: 189 YDSDYDRGSRRDGNWRRRESRDRERDKRGLSRERDQSPPRKHERSRSRGRED 240


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