BLASTX nr result

ID: Papaver23_contig00033872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00033872
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...    69   3e-10
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...    67   1e-09
ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine...    64   2e-08
ref|XP_003599210.1| F-box/kelch-repeat protein [Medicago truncat...    63   3e-08
gb|AAU93580.1| Putative F-box protein, identical [Solanum demissum]    62   5e-08

>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
 Frame = +2

Query: 5   LGYDHKADDYKLAIGLDDDDDKNIT-QIHVYTLASNSWRTGKTVPYRFAFDHFTGVLFNG 181
           LGYDH  +DYK+     D  +  I  ++ VY++A+NSWR  +  P+ F+    +G   +G
Sbjct: 194 LGYDHVNEDYKVVAVFCDPSEYFIECKVKVYSMATNSWRKIQDFPHGFSPFQNSGKFVSG 253

Query: 182 ELHWLAT----AQSIVVLLSLDIGDENFKELQLPPKECLEMKKDPYTILGVLEGHLSLLV 349
            L+W A     + S+ V++SLD+  E ++E+ LPP    E    P   LGVL+G L +  
Sbjct: 254 TLNWAANHSIGSSSLWVIVSLDLHKETYREV-LPPDYEKEDCSTPG--LGVLQGCLCM-- 308

Query: 350 SSYVNGVRIHFEVWEMLDY 406
               +  + HF VW M DY
Sbjct: 309 --NYDYKKTHFVVWMMKDY 325


>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
 Frame = +2

Query: 5   LGYDHKADDYKLAIGLDDDDDKNIT-QIHVYTLASNSWRTGKTVPYRFAFDHFTGVLFNG 181
           LGYDH  +DYK+     D  +  I  ++ VY++A+NSWR  +  P+ F     +G   +G
Sbjct: 195 LGYDHVNEDYKVVAVFCDPSEYFIECKVKVYSMATNSWRKIQDFPHGFLPFQNSGKFVSG 254

Query: 182 ELHWLAT----AQSIVVLLSLDIGDENFKELQLPPKECLEMKKDPYTILGVLEGHLSLLV 349
            L+W A       S  V++SLD+  E ++E+ LPP    E    P   LGVL+G L +  
Sbjct: 255 TLNWAANHSIGPSSFWVIVSLDLHKETYREV-LPPDYEKEDCSTP--SLGVLQGCLCM-- 309

Query: 350 SSYVNGVRIHFEVWEMLDY 406
               +  + HF VW M DY
Sbjct: 310 --NYDYKKTHFVVWMMKDY 326


>ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 394

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
 Frame = +2

Query: 8   GYDHKADDYKL---AIGLDDDDDKNITQIHVYTLASNSWRTGKTVPYRFAFDHFTGVLFN 178
           G+DHK  DYKL   +  +D  D    +Q+ +YTL +N+W+T  ++PY        GV   
Sbjct: 147 GFDHKTRDYKLVRISYFVDLHDRSFDSQVKLYTLRANAWKTLPSLPYALCCARTMGVFVG 206

Query: 179 GELHWLATAQ----SIVVLLSLDIGDENFKELQLPPKECLEMKKDPYTILGVLEGHLSLL 346
             LHW+ T +       ++++ D+  + F+EL LP         D   + G  E  L+LL
Sbjct: 207 NSLHWVVTRKLEPDQPDLIIAFDLTHDIFRELPLP---------DTGGVDGGFEIDLALL 257

Query: 347 VSSYVNGVRIH---FEVWEMLDY 406
             S    V  H    +VW M +Y
Sbjct: 258 GGSLCMTVNFHKTRIDVWVMREY 280


>ref|XP_003599210.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355488258|gb|AES69461.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 378

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 43/133 (32%), Positives = 71/133 (53%)
 Frame = +2

Query: 8   GYDHKADDYKLAIGLDDDDDKNITQIHVYTLASNSWRTGKTVPYRFAFDHFTGVLFNGEL 187
           GYDH  D+YK+ +       KN  ++ VYTL ++ W+  + +PY    +   GV  +G +
Sbjct: 186 GYDHFIDNYKVIVV----STKN--EVSVYTLGTDYWKRIEDIPYNIFGE---GVFVSGTV 236

Query: 188 HWLATAQSIVVLLSLDIGDENFKELQLPPKECLEMKKDPYTILGVLEGHLSLLVSSYVNG 367
           +WLA+  S +  LSLD+  E+++++ LP  E      +   ILGVL   L +L +S    
Sbjct: 237 NWLASDDSFI--LSLDVEKESYQQVLLPDTE------NDLWILGVLRNCLCILATS---- 284

Query: 368 VRIHFEVWEMLDY 406
             +  +VW M +Y
Sbjct: 285 -NLFLDVWIMNEY 296


>gb|AAU93580.1| Putative F-box protein, identical [Solanum demissum]
          Length = 261

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 7/135 (5%)
 Frame = +2

Query: 8   GYDHKADDYKLAI--GLDDDDDKNITQIHVYTLASNSWRTGKTVPYRFAFDHFTGVLFNG 181
           GYD   DDYK+ +   + +D     + +++Y+L ++SWRT       F  +   G   NG
Sbjct: 45  GYDETRDDYKVVVIQCIYEDSGSCDSVVNIYSLKADSWRTINKFQGNFLVNS-PGKFVNG 103

Query: 182 ELHWLATAQ----SIVVLLSLDIGDENFKELQLPPKECLEMKKDPYTI-LGVLEGHLSLL 346
           +L+W  +A     ++  ++SLD+ DE ++ L+LP        K  Y + LGV+E HLS+ 
Sbjct: 104 KLYWALSADVDTFNMCNIISLDLADETWRRLELPD----SYGKGSYPLALGVVESHLSVF 159

Query: 347 VSSYVNGVRIHFEVW 391
             + + G   + +VW
Sbjct: 160 CLNCIEGT--NSDVW 172


Top