BLASTX nr result

ID: Papaver23_contig00033859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00033859
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28363.3| unnamed protein product [Vitis vinifera]              280   2e-73
ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containi...   280   2e-73
ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containi...   150   3e-34
ref|XP_002867196.1| pentatricopeptide repeat-containing protein ...   149   3e-34
gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygr...   149   5e-34

>emb|CBI28363.3| unnamed protein product [Vitis vinifera]
          Length = 930

 Score =  280 bits (715), Expect = 2e-73
 Identities = 140/216 (64%), Positives = 168/216 (77%)
 Frame = +1

Query: 1    HKSPNSITFRSALKAYAQMGLVSEAFNLLISMEKNYDIEPMIEHYSCIVEVLGRAGMFEE 180
            +K  +  TFRS L A AQMGLV EAF L  SM++ Y IEP+ EHYSC+VEVLGRAGMFEE
Sbjct: 660  NKPADQSTFRSVLNACAQMGLVDEAFRLFFSMKEVYGIEPLEEHYSCMVEVLGRAGMFEE 719

Query: 181  AKEFINRVFKFEPVPNAWKILLSGCRIRGDMSIAKYIAEKLVELEPTDVTANLLLQQVLL 360
              +FIN V  F+  P  W+ LLS  RI G+M +A+Y AEKL+ELEP+D +ANLLL+QVLL
Sbjct: 720  VLDFINGVPTFKLGPLIWRTLLSSSRIHGNMKVAQYAAEKLLELEPSDFSANLLLEQVLL 779

Query: 361  AEGNWYNATKMKTNCNSMRSSSSWIEVRNKVYEFVSDQVPEEAISTKLSGIERTMKELGY 540
              G W NA K+KT   SMR+SSSWIE+RN++YEF SD+ P + +S KL+ IE  M+ELGY
Sbjct: 780  TLGEWDNALKLKTKTKSMRASSSWIEIRNRIYEFASDENPAKEVSAKLAEIEGKMEELGY 839

Query: 541  VADRNHLLHNAEEEEYTGPGLHHTEMKALAFGLLSL 648
            VAD+NHLLHNAEEEEY G GLHHTEMKALAFGL+SL
Sbjct: 840  VADKNHLLHNAEEEEYDGVGLHHTEMKALAFGLISL 875


>ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 906

 Score =  280 bits (715), Expect = 2e-73
 Identities = 140/216 (64%), Positives = 168/216 (77%)
 Frame = +1

Query: 1    HKSPNSITFRSALKAYAQMGLVSEAFNLLISMEKNYDIEPMIEHYSCIVEVLGRAGMFEE 180
            +K  +  TFRS L A AQMGLV EAF L  SM++ Y IEP+ EHYSC+VEVLGRAGMFEE
Sbjct: 636  NKPADQSTFRSVLNACAQMGLVDEAFRLFFSMKEVYGIEPLEEHYSCMVEVLGRAGMFEE 695

Query: 181  AKEFINRVFKFEPVPNAWKILLSGCRIRGDMSIAKYIAEKLVELEPTDVTANLLLQQVLL 360
              +FIN V  F+  P  W+ LLS  RI G+M +A+Y AEKL+ELEP+D +ANLLL+QVLL
Sbjct: 696  VLDFINGVPTFKLGPLIWRTLLSSSRIHGNMKVAQYAAEKLLELEPSDFSANLLLEQVLL 755

Query: 361  AEGNWYNATKMKTNCNSMRSSSSWIEVRNKVYEFVSDQVPEEAISTKLSGIERTMKELGY 540
              G W NA K+KT   SMR+SSSWIE+RN++YEF SD+ P + +S KL+ IE  M+ELGY
Sbjct: 756  TLGEWDNALKLKTKTKSMRASSSWIEIRNRIYEFASDENPAKEVSAKLAEIEGKMEELGY 815

Query: 541  VADRNHLLHNAEEEEYTGPGLHHTEMKALAFGLLSL 648
            VAD+NHLLHNAEEEEY G GLHHTEMKALAFGL+SL
Sbjct: 816  VADKNHLLHNAEEEEYDGVGLHHTEMKALAFGLISL 851


>ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  150 bits (378), Expect = 3e-34
 Identities = 89/225 (39%), Positives = 131/225 (58%), Gaps = 10/225 (4%)
 Frame = +1

Query: 10   PNSITFRSALKAYAQMGLVSEAFNLLISMEKNYDIEPMIEHYSCIVEVLGRAGMFEEAKE 189
            P+ +TF   L A +  GLVSEA+    SM+KNY IEP IEHYSC+V+ L RAG  EEA++
Sbjct: 1338 PDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEK 1397

Query: 190  FINRVFKFEPVPNAWKILLSGCRIRGDMSIAKYIAEKLVELEPTDVTANLLLQQVLLAEG 369
             I+ +  FE   + ++ LL+ CR++ D    K +AEKL+ LEP+D  A +LL  V  A  
Sbjct: 1398 VISSM-PFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAAN 1456

Query: 370  NWYNATKMKTNCNSMRSSS-------SWIEVRNKVYEFVS-DQVPEE--AISTKLSGIER 519
             W N    +   N MR  +       SW++++NKV+ FV+ D+  EE   I  K+  I +
Sbjct: 1457 QWENVASAR---NMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMK 1513

Query: 520  TMKELGYVADRNHLLHNAEEEEYTGPGLHHTEMKALAFGLLSLAP 654
             ++E GYV D +  L + EEE+      +H+E  A+A+GL+   P
Sbjct: 1514 RIREEGYVPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPP 1558


>ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297313032|gb|EFH43455.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 997

 Score =  149 bits (377), Expect = 3e-34
 Identities = 87/222 (39%), Positives = 127/222 (57%), Gaps = 7/222 (3%)
 Frame = +1

Query: 10   PNSITFRSALKAYAQMGLVSEAFNLLISMEKNYDIEPMIEHYSCIVEVLGRAGMFEEAKE 189
            P+ +TF   L A +  GLVSEA+  + SM ++Y I+P IEHYSC+ + LGRAG+ +EA+ 
Sbjct: 724  PDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAEN 783

Query: 190  FINRVFKFEPVPNAWKILLSGCRIRGDMSIAKYIAEKLVELEPTDVTANLLLQQVLLAEG 369
             I+ +   E   + ++ LL+ CR++GD    K +A KL+ELEP D +A +LL  +  A  
Sbjct: 784  LIDSM-SMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAAS 842

Query: 370  NW----YNATKMKTNCNSMRSSSSWIEVRNKVYEFVSD---QVPEEAISTKLSGIERTMK 528
             W       T MK +        SWIEV+NK++ FV D       E I  K+  + R +K
Sbjct: 843  KWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYKKVKDMIRDIK 902

Query: 529  ELGYVADRNHLLHNAEEEEYTGPGLHHTEMKALAFGLLSLAP 654
            + GYV + +  L + EEEE      +H+E  A+AFGLLS  P
Sbjct: 903  QEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPP 944


>gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  149 bits (376), Expect = 5e-34
 Identities = 84/222 (37%), Positives = 125/222 (56%), Gaps = 7/222 (3%)
 Frame = +1

Query: 10   PNSITFRSALKAYAQMGLVSEAFNLLISMEKNYDIEPMIEHYSCIVEVLGRAGMFEEAKE 189
            P+ ITF  AL A A  GL+ E  +   SM K+++IEP +EHY C+V++ GRAG+  EA E
Sbjct: 708  PDWITFVGALSACAHAGLIKEGLHHFESM-KDFNIEPRMEHYGCMVDLFGRAGLLHEAVE 766

Query: 190  FINRVFKFEPVPNAWKILLSGCRIRGDMSIAKYIAEKLVELEPTDVTANLLLQQVLLAEG 369
            FIN++ + +P    W  LL  C++  D+ +A+ +A+K +EL+P D    ++L  +  A G
Sbjct: 767  FINKM-QVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAG 825

Query: 370  NWYNATKMKTNCNS----MRSSSSWIEVRNKVYEFVSDQVPE---EAISTKLSGIERTMK 528
             W   TKM+          +   SWIEV  +V+ F SD       E I  +L  +   MK
Sbjct: 826  MWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMK 885

Query: 529  ELGYVADRNHLLHNAEEEEYTGPGLHHTEMKALAFGLLSLAP 654
            +LGYV D  ++LH+ E+ E      HH+E  A+A+GLL   P
Sbjct: 886  KLGYVPDTRYVLHDVEDSEKEHALCHHSERLAIAYGLLKTPP 927


Top