BLASTX nr result

ID: Papaver23_contig00033802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00033802
         (817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308775.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-21
ref|XP_002322538.1| predicted protein [Populus trichocarpa] gi|2...    73   7e-21
emb|CBI33123.3| unnamed protein product [Vitis vinifera]               72   2e-20
ref|XP_002262798.2| PREDICTED: transcription initiation factor I...    72   2e-20
ref|XP_003594206.1| Transcription initiation factor IIF subunit ...    66   3e-18

>ref|XP_002308775.1| predicted protein [Populus trichocarpa] gi|222854751|gb|EEE92298.1|
           predicted protein [Populus trichocarpa]
          Length = 541

 Score = 72.4 bits (176), Expect(2) = 5e-21
 Identities = 31/38 (81%), Positives = 36/38 (94%)
 Frame = -3

Query: 116 EKNADNKWALRKEGLVGRQVTDTLREKFKNKPWLLEDE 3
           +KNA+NKW+L KEG+ GRQ+TDTLREKFKNKPWLLEDE
Sbjct: 86  KKNAENKWSLLKEGIHGRQITDTLREKFKNKPWLLEDE 123



 Score = 55.1 bits (131), Expect(2) = 5e-21
 Identities = 23/31 (74%), Positives = 30/31 (96%)
 Frame = -1

Query: 202 QEYNVRACSTSDKNYFIGRFVSGVPGFSKRK 110
           +EYNVRA ++S+KNYFIGRFV+G+PGFSK+K
Sbjct: 57  REYNVRASTSSEKNYFIGRFVTGLPGFSKKK 87


>ref|XP_002322538.1| predicted protein [Populus trichocarpa] gi|222867168|gb|EEF04299.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score = 72.8 bits (177), Expect(2) = 7e-21
 Identities = 30/38 (78%), Positives = 36/38 (94%)
 Frame = -3

Query: 116 EKNADNKWALRKEGLVGRQVTDTLREKFKNKPWLLEDE 3
           +KNA+NKW+L KEG++GRQ+TD LREKFKNKPWLLEDE
Sbjct: 86  KKNAENKWSLHKEGILGRQITDALREKFKNKPWLLEDE 123



 Score = 54.3 bits (129), Expect(2) = 7e-21
 Identities = 23/31 (74%), Positives = 29/31 (93%)
 Frame = -1

Query: 202 QEYNVRACSTSDKNYFIGRFVSGVPGFSKRK 110
           +EYNVRA ++SDKNYFIGRFV+G+P FSK+K
Sbjct: 57  REYNVRASTSSDKNYFIGRFVTGLPSFSKKK 87


>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score = 71.6 bits (174), Expect(2) = 2e-20
 Identities = 31/38 (81%), Positives = 35/38 (92%)
 Frame = -3

Query: 116 EKNADNKWALRKEGLVGRQVTDTLREKFKNKPWLLEDE 3
           +KNADNKW+L KEGL GRQV+D LREK+KNKPWLLEDE
Sbjct: 86  KKNADNKWSLHKEGLQGRQVSDALREKYKNKPWLLEDE 123



 Score = 53.9 bits (128), Expect(2) = 2e-20
 Identities = 23/31 (74%), Positives = 28/31 (90%)
 Frame = -1

Query: 202 QEYNVRACSTSDKNYFIGRFVSGVPGFSKRK 110
           +EYNVR  S+ DKNYFIGRFV+G+PGFSK+K
Sbjct: 57  REYNVRTNSSGDKNYFIGRFVTGLPGFSKKK 87


>ref|XP_002262798.2| PREDICTED: transcription initiation factor IIF subunit alpha-like
           [Vitis vinifera]
          Length = 534

 Score = 71.6 bits (174), Expect(2) = 2e-20
 Identities = 31/38 (81%), Positives = 35/38 (92%)
 Frame = -3

Query: 116 EKNADNKWALRKEGLVGRQVTDTLREKFKNKPWLLEDE 3
           +KNADNKW+L KEGL GRQV+D LREK+KNKPWLLEDE
Sbjct: 81  KKNADNKWSLHKEGLQGRQVSDALREKYKNKPWLLEDE 118



 Score = 53.9 bits (128), Expect(2) = 2e-20
 Identities = 23/31 (74%), Positives = 28/31 (90%)
 Frame = -1

Query: 202 QEYNVRACSTSDKNYFIGRFVSGVPGFSKRK 110
           +EYNVR  S+ DKNYFIGRFV+G+PGFSK+K
Sbjct: 52  REYNVRTNSSGDKNYFIGRFVTGLPGFSKKK 82


>ref|XP_003594206.1| Transcription initiation factor IIF subunit alpha [Medicago
           truncatula] gi|87241158|gb|ABD33016.1| Transcription
           Factor IIF, Rap30/Rap74, interaction [Medicago
           truncatula] gi|355483254|gb|AES64457.1| Transcription
           initiation factor IIF subunit alpha [Medicago
           truncatula]
          Length = 536

 Score = 65.9 bits (159), Expect(2) = 3e-18
 Identities = 27/38 (71%), Positives = 35/38 (92%)
 Frame = -3

Query: 116 EKNADNKWALRKEGLVGRQVTDTLREKFKNKPWLLEDE 3
           +K+A+NKW+L+K+GL GRQVTD  REK+KN+PWLLEDE
Sbjct: 84  KKSAENKWSLQKDGLKGRQVTDATREKYKNRPWLLEDE 121



 Score = 52.4 bits (124), Expect(2) = 3e-18
 Identities = 22/31 (70%), Positives = 28/31 (90%)
 Frame = -1

Query: 202 QEYNVRACSTSDKNYFIGRFVSGVPGFSKRK 110
           +EYNVRA S +DKNYFIGRF++G+P FSK+K
Sbjct: 55  REYNVRASSANDKNYFIGRFMTGLPDFSKKK 85


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