BLASTX nr result

ID: Papaver23_contig00033714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00033714
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...   114   9e-24
gb|EEC74955.1| hypothetical protein OsI_10942 [Oryza sativa Indi...   114   9e-24
gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japo...   109   2e-22
gb|ABA96650.1| retrotransposon protein, putative, unclassified [...   108   7e-22
ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [S...   108   7e-22

>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score =  114 bits (285), Expect = 9e-24
 Identities = 57/151 (37%), Positives = 84/151 (55%), Gaps = 1/151 (0%)
 Frame = -3

Query: 533  SDFWWGKDSNTKGYRIKSWPFMCKPISMGGLGFRDADKMNQAMLARIAWRIISEPNSWWV 354
            +DFWWG + +T+G   KSW F+ +P   GG+GFR+ +  N ++LA+ AWR+   P + W 
Sbjct: 1432 ADFWWG-NVDTRGIHWKSWDFLARPKKDGGMGFRNLEDFNNSLLAKQAWRLHQNPFALWA 1490

Query: 353  XXXXXXXXXXXXFLAIKKNQRSSWMWNCIVQGANLIHKYTCWEVGDGQSINIWTDQWIPD 174
                        FL   K    SW+WN ++ G N IHK   W +G+G S+NI  D WIP 
Sbjct: 1491 RVLEQLYYPRSSFLEAPKGPNPSWIWNSLLIGRNFIHKEALWNIGNGFSVNIVGDNWIPS 1550

Query: 173  L-DTTLDQICSERNTQLTLVSDLINPDTNRW 84
            +  +T+    +E N++   V +LIN DT  W
Sbjct: 1551 IPPSTVSLPLNEDNSR---VCELINWDTKSW 1578


>gb|EEC74955.1| hypothetical protein OsI_10942 [Oryza sativa Indica Group]
          Length = 961

 Score =  114 bits (285), Expect = 9e-24
 Identities = 62/170 (36%), Positives = 83/170 (48%)
 Frame = -3

Query: 527  FWWGKDSNTKGYRIKSWPFMCKPISMGGLGFRDADKMNQAMLARIAWRIISEPNSWWVXX 348
            FWWG+D N +     SW  + KP   GG+GFRD    NQA+LAR AWR+I  P+S     
Sbjct: 565  FWWGEDQNNRKVHWISWQQLIKPKGQGGIGFRDLKLFNQALLARQAWRLIQYPSSLCAQV 624

Query: 347  XXXXXXXXXXFLAIKKNQRSSWMWNCIVQGANLIHKYTCWEVGDGQSINIWTDQWIPDLD 168
                       +       SS  W  I+ G  L+ K   W + DG  + IW D WIP  +
Sbjct: 625  LKAKYFPSGDLIDTAFPVDSSETWKGIMHGLELLKKGLIWRISDGSKVKIWRDNWIP-RE 683

Query: 167  TTLDQICSERNTQLTLVSDLINPDTNRWNQEIIVASFPHIIAHSILNINL 18
              L  I  +  ++L  VSDL+ PD  +WN+E++   F    A  IL I L
Sbjct: 684  HNLKVIGRKTRSRLKWVSDLLLPDRQQWNEELVRNMFYPPDAEGILRIQL 733


>gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japonica Group]
          Length = 615

 Score =  109 bits (273), Expect = 2e-22
 Identities = 57/168 (33%), Positives = 80/168 (47%)
 Frame = -3

Query: 527 FWWGKDSNTKGYRIKSWPFMCKPISMGGLGFRDADKMNQAMLARIAWRIISEPNSWWVXX 348
           FWW +  N       SW  +C+    GG+G+RD    N AMLAR  WR+I EP S     
Sbjct: 281 FWWAQQENENKVHWVSWELLCRRKEQGGIGYRDLHLFNLAMLARQGWRLIMEPMSLCAQV 340

Query: 347 XXXXXXXXXXFLAIKKNQRSSWMWNCIVQGANLIHKYTCWEVGDGQSINIWTDQWIPDLD 168
                      +A+++    S+ W  IV+G   + K   W VGDG +I+IW D W+P   
Sbjct: 341 LRAKYFPTGDLMAVREKPGISYSWRSIVRGIQALKKGLIWRVGDGTNIDIWHDPWLPS-G 399

Query: 167 TTLDQICSERNTQLTLVSDLINPDTNRWNQEIIVASFPHIIAHSILNI 24
            T   I     T +  V+DLI+P   +W++E+I   F       IL I
Sbjct: 400 ITRRPITPRGRTVVNKVTDLIDPTIGKWDKELIEGLFWEEDVKQILTI 447


>gb|ABA96650.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1100

 Score =  108 bits (269), Expect = 7e-22
 Identities = 54/153 (35%), Positives = 81/153 (52%)
 Frame = -3

Query: 527  FWWGKDSNTKGYRIKSWPFMCKPISMGGLGFRDADKMNQAMLARIAWRIISEPNSWWVXX 348
            FWWG+D + +     SW  + KP SMGG+GF+D    NQA+LAR AWR++  P+S     
Sbjct: 942  FWWGEDRSQRKVHWASWQQLIKPKSMGGMGFKDMKIFNQALLARQAWRLVQFPDSLCARV 1001

Query: 347  XXXXXXXXXXFLAIKKNQRSSWMWNCIVQGANLIHKYTCWEVGDGQSINIWTDQWIPDLD 168
                       L    +  SS  W  IV G  L+ K   W +G G+ ++IW D W+P  +
Sbjct: 1002 LKAKYYPNGDLLDTAFSSVSSDSWKGIVHGLELLKKGVIWRIGTGRKVHIWRDDWLP-RE 1060

Query: 167  TTLDQICSERNTQLTLVSDLINPDTNRWNQEII 69
              L  +  +  T+L  VSDL+ P+   W++++I
Sbjct: 1061 HGLKVMGKKTGTRLKWVSDLLVPNEQSWDEQVI 1093


>ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [Sorghum bicolor]
           gi|241922442|gb|EER95586.1| hypothetical protein
           SORBIDRAFT_01g048580 [Sorghum bicolor]
          Length = 517

 Score =  108 bits (269), Expect = 7e-22
 Identities = 61/168 (36%), Positives = 79/168 (47%)
 Frame = -3

Query: 527 FWWGKDSNTKGYRIKSWPFMCKPISMGGLGFRDADKMNQAMLARIAWRIISEPNSWWVXX 348
           +WW +   T      SW  +      GGLGFRD    N AMLAR AWRI+ EP++     
Sbjct: 249 YWWSEQDKTNKIHWLSWEKLTLSKKRGGLGFRDLYHFNLAMLARQAWRILIEPDTLCGRV 308

Query: 347 XXXXXXXXXXFLAIKKNQRSSWMWNCIVQGANLIHKYTCWEVGDGQSINIWTDQWIPDLD 168
                      L  K      + W  I+ G NL+ +   W +G G ++NIWTD WIP   
Sbjct: 309 LKARYFPNSNILQCKARAGILYTWRSIIDGINLLKEGIIWRIGSGSNVNIWTDPWIP-RG 367

Query: 167 TTLDQICSERNTQLTLVSDLINPDTNRWNQEIIVASFPHIIAHSILNI 24
           TT   I       +T VSDLINP T  W++ +I   F    A +IL I
Sbjct: 368 TTRKPITPRGRYLITKVSDLINPSTGTWDENLISDVFWPEDAEAILMI 415


Top