BLASTX nr result
ID: Papaver23_contig00033647
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00033647
(717 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [S... 71 4e-15
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta... 75 3e-14
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 70 2e-12
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 63 2e-12
gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza ... 64 4e-12
>ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor]
gi|241936261|gb|EES09406.1| hypothetical protein
SORBIDRAFT_05g005061 [Sorghum bicolor]
Length = 753
Score = 70.9 bits (172), Expect(2) = 4e-15
Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 2/165 (1%)
Frame = -3
Query: 694 LLNVFRKYRPNVICIFETMVDSDIVYKYNHHLPFDSWYVVPAVGKSGGLALGFFANSGIE 515
L ++ + Y P+V+ I ET + V + L FD+ + V + G+SGGL G F N+ +
Sbjct: 20 LRDLAKDYAPSVMFIMETQISKYRVENLRYTLSFDNSFAVNSSGRSGGL--GLFWNNDVL 77
Query: 514 VISSSFSMIHIICDITPLIKNCL-ISFIYGSLNVMGMQNQWNFLNHMNENDNHPWLLMGD 338
+ +S HI I+ K +SFIYG N W+ + M + + PW+ MGD
Sbjct: 78 LSIQKYSNYHIDTIISEHGKEPRRMSFIYGEPNRSFRYRTWDIMKQMRSDTDLPWVCMGD 137
Query: 337 FNFILHASEKRG-NSDNYFPSDFVRYSLLQLKMNEILAFGNHFTW 206
FN IL E+ G N + + VR ++ ++ +I G +T+
Sbjct: 138 FNEILRREEQLGPNEREEYLMEGVRDAVDMCQLRDIGYIGLDWTF 182
Score = 36.2 bits (82), Expect(2) = 4e-15
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -2
Query: 161 KLDRGFMNDKWLPVFSLTRVTNLGRVYSDHCPILLN 54
+LDR + W F L V +L V SDHCPILL+
Sbjct: 195 RLDRALASVNWCARFPLAAVQHLTAVKSDHCPILLS 230
>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1750
Score = 74.7 bits (182), Expect(2) = 3e-14
Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 2/169 (1%)
Frame = -3
Query: 694 LLNVFRKYRPNVICIFETMVDSDIVYKYNHHLPFDSWYVVPAVGKSGGLALGFFANSGIE 515
L +FR Y +++ + ET+ D V K + L F + P G+SGGLAL + N +
Sbjct: 401 LFRLFRMYNYDILFLVETLNQCDKVCKLAYDLGFPNVITQPPNGRSGGLALMWKNNVSLS 460
Query: 514 VISSSFSMIHIICDITPLIKNCLISFIYGSLNVMGMQNQWNFLNHMNENDNHPWLLMGDF 335
+IS +I +T K+ +S +YG W L H+++N N WLL+GDF
Sbjct: 461 LISQDERLID--SHVTFNNKSFYLSCVYGHPTQSERHQLWQTLEHISDNRNAEWLLVGDF 518
Query: 334 NFILHASEKRGN--SDNYFPSDFVRYSLLQLKMNEILAFGNHFTWCNRR 194
N IL +EK G + + +F R + + ++ + G+ F+W R
Sbjct: 519 NEILSNAEKIGGPMREEWTFRNF-RNMVSHCDIEDMRSKGDRFSWVGER 566
Score = 29.3 bits (64), Expect(2) = 3e-14
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2
Query: 158 LDRGFMNDKWLPVFSLTRVTNLGRVYSDHCPILLN 54
LDR F+N W F + L SDH P+L++
Sbjct: 575 LDRVFINSAWTATFPYAEIEFLDFTGSDHKPVLVH 609
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 69.7 bits (169), Expect(2) = 2e-12
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 3/171 (1%)
Frame = -3
Query: 697 HLLNVFRKYRPNVICIFETMVDSDIVYKYNHHLPFDSWYVVPAVGKSGGLALGFFANSGI 518
+L + + + P+++ + ET D VYK L +D + V G+SGGLA+ + ++ I
Sbjct: 18 YLKEMKKDHFPDILFLMETKNSQDFVYKVFCWLGYDFIHTVEPEGRSGGLAIFWKSHLEI 77
Query: 517 EVISSSFSMIHIICDITPLIKNCLISFIYGSLNVMGMQNQ-WNFLNHMNENDNHPWLLMG 341
E + + +++ + ++ K IS +YG L V M+ + W LN + W L+G
Sbjct: 78 EFLYADKNLMDL--QVSSRNKVWFISCVYG-LPVTHMRPKLWEHLNSIGLKRAEAWCLIG 134
Query: 340 DFNFILHASEKRGNSDNYFPSDF--VRYSLLQLKMNEILAFGNHFTWCNRR 194
DFN I EK G PS F + LL M+E+ + GN FTW R
Sbjct: 135 DFNDIRSNDEKLG-GPRRSPSSFQCFEHMLLNCSMHELGSTGNSFTWGGNR 184
Score = 28.5 bits (62), Expect(2) = 2e-12
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -2
Query: 161 KLDRGFMNDKWLPVFSLTRVTNLGRVYSDHCPILL 57
KLDR F N W +F L + SDH P+L+
Sbjct: 192 KLDRCFGNPAWFSIFPNAHQWFLEKFGSDHRPVLV 226
>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1362
Score = 63.2 bits (152), Expect(2) = 2e-12
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 3/158 (1%)
Frame = -3
Query: 670 RPNVICIFETMVDSDIVYKYNHHLPFDSWYVVPAVGKSGGLALGFFANSGIEVISSSFSM 491
RPN++ + ETMVDS ++ K F + + + G SGG+ L + + ++V SFS
Sbjct: 28 RPNIVFVMETMVDSQVLEKIRKRCGFMNGLCLSSNGNSGGMGLWW---NEMDVTVESFSA 84
Query: 490 IHIICDITPLIKNCLISF--IYGSLNVMGMQNQWNFLNHMNENDNHPWLLMGDFNFILHA 317
HI + KN + + IYG W+ L + + + P L GDFN I
Sbjct: 85 HHIHAVVLDENKNPIWNAMGIYGWPETSNKHLTWSLLRRLKQQCSLPVLFFGDFNEITSI 144
Query: 316 SEKRGNSDN-YFPSDFVRYSLLQLKMNEILAFGNHFTW 206
EK G + D R + + ++ GN FTW
Sbjct: 145 EEKEGGAPRCERVMDAFREVIDDCAVKDLGYVGNRFTW 182
Score = 34.7 bits (78), Expect(2) = 2e-12
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = -2
Query: 164 KKLDRGFMNDKWLPVFSLTRVTNLGRVYSDHCPILL 57
++LDR ND+W F V +L R SDH P+LL
Sbjct: 194 ERLDRMLANDEWCDNFPSWEVVHLPRYRSDHAPLLL 229
>gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 64.3 bits (155), Expect(2) = 4e-12
Identities = 50/166 (30%), Positives = 77/166 (46%), Gaps = 8/166 (4%)
Frame = -3
Query: 673 YRPNVICIFETMVDSDIVYKYNHHLPFDSWYVVPAVGKSGGLALGFFANSGIEVISSSFS 494
+RP ++ + ET D Y + + + V VGK GGLAL F + + V+ S++
Sbjct: 10 HRPKIVFLAETRQDQ---YMVQNRIGLRRCFTVNGVGKGGGLAL--FWDESMNVVLKSYN 64
Query: 493 MIHIICDITPLIKNCLI---SFIYGSLNVMGMQNQWNFLNHMNENDNHPWLLMGDFNFIL 323
HI IT L +C +F+YG W+ L + N PWL++GDFN +
Sbjct: 65 SRHIDVLITEL--DCCTWRATFVYGEPRAQDRHLMWSLLRRIRSNSGDPWLMIGDFNEAM 122
Query: 322 HASE-----KRGNSDNYFPSDFVRYSLLQLKMNEILAFGNHFTWCN 200
+E KR S DF R L + +++I G +T+CN
Sbjct: 123 WQTEHKSHRKRSESQ---MRDF-REVLSECDLHDIGFQGAPWTFCN 164
Score = 32.7 bits (73), Expect(2) = 4e-12
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -2
Query: 161 KLDRGFMNDKWLPVFSLTRVTNLGRVYSDHCPILLNCFHQQLNLNIPFKIFK 6
+LDRG + W F +T+L SDH P+LL ++ L P KI +
Sbjct: 175 RLDRGVASPAWSSRFPQAVITHLTTPSSDHAPLLLE--REETTLARPMKIMR 224