BLASTX nr result
ID: Papaver23_contig00033630
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00033630
(560 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas... 55 5e-19
gb|AAD37019.2| putative non-LTR retrolelement reverse transcript... 55 1e-17
ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2... 55 1e-17
emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulga... 59 2e-15
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 47 6e-15
>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
H; Endonuclease/exonuclease/phosphatase [Medicago
truncatula]
Length = 1246
Score = 55.1 bits (131), Expect(3) = 5e-19
Identities = 19/82 (23%), Positives = 43/82 (52%)
Frame = -1
Query: 419 FKFFGEWLKHADCKNLIQDSWNINVKGSSAHKVNIKLSTVKHTLKLWNRKSFANINENIH 240
FKFF W +H DC+ ++ ++W+ + +G ++ KL +K + WNR F +++ +
Sbjct: 247 FKFFKTWTEHEDCRRIVAENWSKHTRGHGMTRLQAKLKHMKQVFRHWNRTVFGDVDRKVR 306
Query: 239 NIKNQLTQINSTVNCTNKTNDL 174
++ +I ++ ++ L
Sbjct: 307 MAVEEVNRIQQIIDSVGFSDQL 328
Score = 44.7 bits (104), Expect(3) = 5e-19
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = -2
Query: 172 LD*ELNLLSGYAIKENFWKDKSRDQNLALGDRNTRYFHTKAKQRFRRNRIDMIRNED 2
L+ L L ++ W++K RDQ GDRNT YFH +K R +N I +++ D
Sbjct: 333 LEAHLILTKALHYQDELWREKLRDQRFIHGDRNTAYFHRISKVRATKNTISFLQDGD 389
Score = 39.7 bits (91), Expect(3) = 5e-19
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = -3
Query: 552 FTWNNNRQKDDNIKQRLDRALVNGKWNRKYPNSSIKQLG 436
+TW+N R DN+ RLDRA+ N +W + +SS LG
Sbjct: 180 YTWSNGRLGSDNVALRLDRAICNEEWVNFWRSSSCSALG 218
>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 855
Score = 55.1 bits (131), Expect(3) = 1e-17
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Frame = -1
Query: 422 PFKFFGEWLKHADCKNLIQDSWNINVKGSSAHKVNIKLSTVKHTLKLWNRKSFANINENI 243
PF+F WL H+ K+L+Q SWN + + + L+ +K LK WNR+ F ++N
Sbjct: 656 PFRFEAAWLTHSGFKDLLQASWN------TEGETPVALAALKSKLKKWNREVFGDVNRRK 709
Query: 242 HNIKN------QLTQINSTVNCTNKTNDLAR 168
++ N +L +IN T N +K +L +
Sbjct: 710 ESLMNEIKVVQELLEINQTDNLLSKEEELIK 740
Score = 52.0 bits (123), Expect(3) = 1e-17
Identities = 23/44 (52%), Positives = 32/44 (72%)
Frame = -2
Query: 133 KENFWKDKSRDQNLALGDRNTRYFHTKAKQRFRRNRIDMIRNED 2
+E W KSR++ + LGDRNT+YFHT R RRNRI+M++ +D
Sbjct: 749 EEVLWFQKSREKWVELGDRNTKYFHTMTVVRRRRNRIEMLKADD 792
Score = 27.7 bits (60), Expect(3) = 1e-17
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -3
Query: 552 FTWNNNRQKDDNIKQRLDRALVNGKWNRKYPNSSIKQL 439
FTW R + + +RLDR L + K+ +S+ L
Sbjct: 593 FTWKRGRVESTFVAKRLDRVLCRPQTRLKWQEASVTHL 630
>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
predicted protein [Populus trichocarpa]
Length = 819
Score = 54.7 bits (130), Expect(3) = 1e-17
Identities = 22/79 (27%), Positives = 46/79 (58%)
Frame = -1
Query: 422 PFKFFGEWLKHADCKNLIQDSWNINVKGSSAHKVNIKLSTVKHTLKLWNRKSFANINENI 243
PF+FF W+ H + L++ W+ N +G +++ KL +K LKL+N F+NI++ +
Sbjct: 621 PFRFFDMWMDHDEFMPLVKKVWDQNSRGCPMYQLCCKLRKLKQELKLFNMAHFSNISDRV 680
Query: 242 HNIKNQLTQINSTVNCTNK 186
+ KN++ + ++ ++
Sbjct: 681 RDAKNKMDKAQQALHTAHE 699
Score = 43.9 bits (102), Expect(3) = 1e-17
Identities = 20/44 (45%), Positives = 29/44 (65%)
Frame = -2
Query: 133 KENFWKDKSRDQNLALGDRNTRYFHTKAKQRFRRNRIDMIRNED 2
+E+F+K K+R Q L+LGD+NT YFH R RN++ + ED
Sbjct: 721 EESFFKQKARIQWLSLGDQNTSYFHKSVNGRQNRNKLLSLTRED 764
Score = 36.2 bits (82), Expect(3) = 1e-17
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = -3
Query: 552 FTWNNNRQKDDNIKQRLDRALVNGKWNRKYPNSSIKQL 439
+TW+N + ++ I ++LDR LVN KWN K+P S + L
Sbjct: 561 YTWSN-QCPENLIMRKLDRVLVNEKWNLKFPLSEARFL 597
>emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1381
Score = 59.3 bits (142), Expect(3) = 2e-15
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Frame = -1
Query: 443 NWDDGPTPFKFFGEWLKHADCKNLIQDSWNINVKGSSAHKVNIKLSTVKHTLKLWNRKSF 264
NW GP PF+F WL H C +I+D W + G+ + KL K LK+WN F
Sbjct: 233 NW--GPRPFRFQNCWLSHPGCLQIIKDVWASHTSGN----LTDKLKETKKRLKIWNSSEF 286
Query: 263 ANINENIHNIKNQLTQINSTVNCTN-KTNDLARLR-TELAKWVCY*RK 126
+I+ NI +++++ ++ N + + +LA R +++ WV RK
Sbjct: 287 GHIDRNIEELEDRIHNLDLISNGRDLQLEELAERRSSQMELWVWLRRK 334
Score = 41.2 bits (95), Expect(3) = 2e-15
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = -2
Query: 133 KENFWKDKSRDQNLALGDRNTRYFHTKAKQRFRRNRI 23
KE FW SR + + GD+NT+YFHT A R ++N I
Sbjct: 334 KEAFWAQNSRAKWIKEGDKNTKYFHTLASTRKKKNTI 370
Score = 26.2 bits (56), Expect(3) = 2e-15
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -3
Query: 552 FTWNNNRQKDDNIKQRLDRALVNGKWNRKYPNSSIKQL 439
FTW + + K +LDR LVN +W +P+ + L
Sbjct: 183 FTWFSGQAKS-----KLDRLLVNPEWVSLFPSLQVSIL 215
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 46.6 bits (109), Expect(3) = 6e-15
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = -3
Query: 558 YCFTWNNNRQKDDNIKQRLDRALVNGKWNRKYPNSSIKQL 439
Y FTW NNR D NI++RLDR + N W K+P S + L
Sbjct: 183 YEFTWTNNRGGDANIQERLDRFVANDLWKIKFPGSFVSHL 222
Score = 46.2 bits (108), Expect(3) = 6e-15
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = -2
Query: 133 KENFWKDKSRDQNLALGDRNTRYFHTKAKQRFRRNRIDMIRNE 5
+E +W +SR + GD+NT++FH KA R +RN + IRNE
Sbjct: 341 EEVYWHQRSRQDWIKSGDKNTKFFHQKASHREQRNNVRRIRNE 383
Score = 32.3 bits (72), Expect(3) = 6e-15
Identities = 14/66 (21%), Positives = 36/66 (54%)
Frame = -1
Query: 419 FKFFGEWLKHADCKNLIQDSWNINVKGSSAHKVNIKLSTVKHTLKLWNRKSFANINENIH 240
F+F WL+ + +++++W ++G+ A I L+ + L W+++ F ++ + I
Sbjct: 252 FRFEAMWLREGESDEVVKETW---MRGTDA---GINLARTANKLLSWSKQKFGHVAKEIR 305
Query: 239 NIKNQL 222
++Q+
Sbjct: 306 MCQHQM 311