BLASTX nr result

ID: Papaver23_contig00033622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00033622
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera]    82   6e-14
gb|AEJ72555.1| putative retroelement polyprotein [Malus x domest...    72   7e-11
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t...    71   2e-10
emb|CAN69747.1| hypothetical protein VITISV_016320 [Vitis vinifera]    51   2e-10
gb|AFN88207.1| integrase core domain containing protein [Phaseol...    70   3e-10

>emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera]
          Length = 1355

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 45/103 (43%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
 Frame = +3

Query: 318 QDRKTKKLIGEGIYSHGLYLFNPCNFVNKALRTTSSLDNQ--ILHYRLGHLSSRIXXXXX 491
           QDR TKK IGEG   HGL+ F+  + + K  + + S  N+  + H RLGH S  +     
Sbjct: 457 QDRITKKTIGEGFQLHGLFYFSSDDRLCKGFQASFSSTNKHSLWHQRLGHPSESVFNKIH 516

Query: 492 XXXXXXXXXCDACQYAKQARLPFPKSTSVSSEPFALVHSDLWG 620
                    CD C Y+K  RLPF  S S SSE F LVHSD+WG
Sbjct: 517 PSLPKGTDGCDICHYSKSTRLPFNLSLSKSSEMFELVHSDVWG 559


>gb|AEJ72555.1| putative retroelement polyprotein [Malus x domestica]
          Length = 1249

 Score = 72.4 bits (176), Expect = 7e-11
 Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
 Frame = +3

Query: 318 QDRKTKKLIGEGIYSHGLYLFNPCNFVNKALRTTSSLDNQILHYRLGHLSSRIXXXXXXX 497
           QDR TKK IGEG+Y  GLY+ +      + L+     ++ + H RL H S+ +       
Sbjct: 402 QDRITKKKIGEGMYKDGLYMLSLQPVEARGLQVGFLKNHLLWHRRLRHPSNLVQSHLFKT 461

Query: 498 XXXXXXX-CDACQYAKQARLPFPKSTSVSSEPFALVHSDLWGAA 626
                   C+ C ++KQ RLPF  S++ S +PF +VHSD+WG A
Sbjct: 462 SENVMTQDCEVCHFSKQTRLPFDVSSTKSCKPFEIVHSDVWGPA 505


>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1462

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 43/106 (40%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
 Frame = +3

Query: 315 LQDRKTKKLIGEGIYSHGLYLFNPCNFVNKALRTTSSLDNQILHYRLGHLSSRIXXXXXX 494
           +QDR T  LIG G   +GLY F     V    R  SS  +Q+ H RLGH SS++      
Sbjct: 431 IQDRITLTLIGAGKQQNGLYFFRGTETVASMTRMDSS--SQLWHCRLGHPSSKVLKLLSF 488

Query: 495 XXXXXXXX----CDACQYAKQARLPFPKSTSVSSEPFALVHSDLWG 620
                       C+ C  AKQ R PFP S + +S PF +VH DLWG
Sbjct: 489 SDSTGHAFDSKTCEICIKAKQTRDPFPLSNNKTSSPFEMVHCDLWG 534


>emb|CAN69747.1| hypothetical protein VITISV_016320 [Vitis vinifera]
          Length = 634

 Score = 50.8 bits (120), Expect(2) = 2e-10
 Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
 Frame = +3

Query: 312 TLQDRKTKKLIGEGIYSHGLYLFNPCNFVNKALRTTSSLDNQILHYRLGHLS-SRIXXXX 488
           T QD   +K+IG G  S GLY     +     + T       ++H RLGH S S+     
Sbjct: 228 TAQDWSMRKMIGIGRESQGLYHLTSPSTHAVCISTDVPF---LIHSRLGHPSLSKFQKMV 284

Query: 489 XXXXXXXXXXCDACQYAKQARLPFPKS-TSVSSEPFALVHSDLWG 620
                     C++CQ  K  R+ FPK   + +   F LVH+D+WG
Sbjct: 285 PCFSSLSSLACESCQLGKHTRVSFPKXLNNQAKSHFELVHTDVWG 329



 Score = 40.0 bits (92), Expect(2) = 2e-10
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
 Frame = +2

Query: 35  LVVERGKSYGNRNKGQGKREIYRCDHCNRTGHTKDRYWQLH---PHLKTTFDSNK 190
           L++ +  S G R+  +G+ +   C +CN+ GHT DR +QLH   PH    +   K
Sbjct: 182 LLLSQTNSRGGRSGNRGRGQRPHCTYCNKLGHTCDRCYQLHGRPPHTAQDWSMRK 236


>gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris]
          Length = 1387

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 42/112 (37%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
 Frame = +3

Query: 309 LTLQDRKTKKLIGEGIYSHGLYLFNPCNFVNKALRTTSSLDNQILHYRLGHLS-SRIXXX 485
           ++LQDR + ++IG G  SHGLY       V   + + S     ++H RLGH S +++   
Sbjct: 444 VSLQDRCSGRMIGTGCESHGLYQLQISAHVGAIMDSPS-----LIHARLGHPSLAKMQQL 498

Query: 486 XXXXXXXXXXXCDACQYAKQARLPFPKSTSV-SSEPFALVHSDLWGAALIDS 638
                      C++CQ+ K  R  FP S S  +S PFALVHSD+WG + I S
Sbjct: 499 VPSLSNVSSLSCESCQFGKHIRSSFPSSVSQRASSPFALVHSDIWGPSRIKS 550


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