BLASTX nr result

ID: Papaver23_contig00033544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00033544
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis...   282   7e-74
emb|CAN67061.1| hypothetical protein VITISV_017538 [Vitis vinifera]   282   7e-74
ref|XP_002529728.1| DNA cross-link repair protein pso2/snm1, put...   263   6e-68
ref|XP_002309909.1| predicted protein [Populus trichocarpa] gi|2...   248   1e-63
ref|XP_002890312.1| hypothetical protein ARALYDRAFT_472127 [Arab...   248   2e-63

>ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis vinifera]
          Length = 552

 Score =  282 bits (722), Expect = 7e-74
 Identities = 153/304 (50%), Positives = 201/304 (66%)
 Frame = -2

Query: 963  QEEILVEVSRTFGCKIYVDKTSNAEFYQALTLLSPEILSEDSSPRFHVFVGFPRLYERAK 784
            QEEIL+ VSR FG KI+VDK +N E +QALT + PEILS+D S RF VF GFP+L ERA+
Sbjct: 192  QEEILINVSRIFGSKIFVDKANNPECFQALTHMVPEILSQDPSSRFQVFEGFPKLCERAQ 251

Query: 783  AKIIEARANSQPDPLFIRPSTQWYACEEESMEIIDWQKKQRYNEAHKDAFGVWHVCYSMH 604
            AK+ EA+ANS P+PL IRPS QWYACEE+ +   + +KK+ +NEA +D FG+WHVCYS+H
Sbjct: 252  AKLAEAQANSLPEPLIIRPSAQWYACEED-LPKTERRKKESFNEAVRDQFGIWHVCYSIH 310

Query: 603  SSREELEWALQLLQPKRVVSTTPDCRAMELNYVRKQPSYGSKVASDDPLWKLLNIGSEVA 424
            SSR+ELEWALQLL PKRVVSTTP CRAMELNYV+K   + S + S DPLWKLL+IG E  
Sbjct: 311  SSRQELEWALQLLAPKRVVSTTPSCRAMELNYVKKH-CFSSHITSSDPLWKLLDIGVEAC 369

Query: 423  PTPSQVASCAASSSHQEDNPKPISAEEYKPQLNNIGSSSSSIEMRLKLSRASTRPPVTLF 244
                        S   E + K  +    + QL  +  S+++ + +L LS  S RPP+TLF
Sbjct: 370  SNLDASVKVVGCSPMMEGSSKTCA----ESQLQLVKISAATQKEQLDLSTPSERPPLTLF 425

Query: 243  GRARQGLQNSGLLVKETKNISMKTNPPNIFSSTKSEEKEIILLEDDSAEVQFKGSEEEKN 64
            G+AR G Q+S    ++ K + MK++P  I ++    E           E++ + S E+K 
Sbjct: 426  GKARFGFQDSTFQHEQEKTMVMKSDPQQIVTNRAENES-----SSQDVELECENSLEKKI 480

Query: 63   EVVV 52
            EV V
Sbjct: 481  EVDV 484


>emb|CAN67061.1| hypothetical protein VITISV_017538 [Vitis vinifera]
          Length = 1066

 Score =  282 bits (722), Expect = 7e-74
 Identities = 153/304 (50%), Positives = 201/304 (66%)
 Frame = -2

Query: 963  QEEILVEVSRTFGCKIYVDKTSNAEFYQALTLLSPEILSEDSSPRFHVFVGFPRLYERAK 784
            QEEIL+ VSR FG KI+VDK +N E +QALT + PEILS+D S RF VF GFP+L ERA+
Sbjct: 706  QEEILINVSRIFGSKIFVDKANNPECFQALTHMVPEILSQDPSSRFQVFEGFPKLCERAQ 765

Query: 783  AKIIEARANSQPDPLFIRPSTQWYACEEESMEIIDWQKKQRYNEAHKDAFGVWHVCYSMH 604
            AK+ EA+ANS P+PL IRPS QWYACEE+ +   + +KK+ +NEA +D FG+WHVCYS+H
Sbjct: 766  AKLAEAQANSLPEPLIIRPSAQWYACEED-LPKTERRKKESFNEAVRDQFGIWHVCYSIH 824

Query: 603  SSREELEWALQLLQPKRVVSTTPDCRAMELNYVRKQPSYGSKVASDDPLWKLLNIGSEVA 424
            SSR+ELEWALQLL PKRVVSTTP CRAMELNYV+K   + S + S DPLWKLL+IG E  
Sbjct: 825  SSRQELEWALQLLAPKRVVSTTPSCRAMELNYVKKH-CFSSHITSSDPLWKLLDIGVEAC 883

Query: 423  PTPSQVASCAASSSHQEDNPKPISAEEYKPQLNNIGSSSSSIEMRLKLSRASTRPPVTLF 244
                        S   E + K  +    + QL  +  S+++ + +L LS  S RPP+TLF
Sbjct: 884  SNLDASVKVVGCSPMMEGSSKTCA----ESQLQLVKISAATQKEQLDLSTPSERPPLTLF 939

Query: 243  GRARQGLQNSGLLVKETKNISMKTNPPNIFSSTKSEEKEIILLEDDSAEVQFKGSEEEKN 64
            G+AR G Q+S    ++ K + MK++P  I ++    E           E++ + S E+K 
Sbjct: 940  GKARFGFQDSTFQHEQEKTMVMKSDPQQIVTNRAENES-----SSQDVELECENSLEKKI 994

Query: 63   EVVV 52
            EV V
Sbjct: 995  EVDV 998


>ref|XP_002529728.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
           communis] gi|223530792|gb|EEF32657.1| DNA cross-link
           repair protein pso2/snm1, putative [Ricinus communis]
          Length = 543

 Score =  263 bits (671), Expect = 6e-68
 Identities = 143/256 (55%), Positives = 178/256 (69%)
 Frame = -2

Query: 963 QEEILVEVSRTFGCKIYVDKTSNAEFYQALTLLSPEILSEDSSPRFHVFVGFPRLYERAK 784
           QEE+L  VSRTFG KIYV+K +N E + ALTL  P+IL++D S RFHVF GFP LYERA 
Sbjct: 192 QEELLANVSRTFGSKIYVEKAANPECFHALTLTVPQILTQDPSSRFHVFNGFPMLYERAA 251

Query: 783 AKIIEARANSQPDPLFIRPSTQWYACEEESMEIIDWQKKQRYNEAHKDAFGVWHVCYSMH 604
           AK+ EA+A+ QP+PL IRPS QWYACEEE     + ++K R +EA +D FG+WHVCYSMH
Sbjct: 252 AKVAEAQASFQPEPLIIRPSAQWYACEEEESG-TESRRKLRLSEAVRDQFGIWHVCYSMH 310

Query: 603 SSREELEWALQLLQPKRVVSTTPDCRAMELNYVRKQPSYGSKVASDDPLWKLLNIGSEVA 424
           SSREELEW LQLL PK VVSTTP CRA EL Y+RK  S+G+++ SDDP+WKLL+I  E +
Sbjct: 311 SSREELEWFLQLLAPKWVVSTTPPCRATELEYIRKH-SFGNQLTSDDPIWKLLDISVEAS 369

Query: 423 PTPSQVASCAASSSHQEDNPKPISAEEYKPQLNNIGSSSSSIEMRLKLSRASTRPPVTLF 244
           P  + +++     S     PK  S E    QL  +  SSS   + + LS  S RP VTLF
Sbjct: 370 P-KAGLSARGIGCSPAGKEPKQTSVES---QLPPVKVSSS---LLMSLSPPSKRPAVTLF 422

Query: 243 GRARQGLQNSGLLVKE 196
           GRAR  +Q+S  L +E
Sbjct: 423 GRARLWIQDSNFLSEE 438


>ref|XP_002309909.1| predicted protein [Populus trichocarpa] gi|222852812|gb|EEE90359.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score =  248 bits (634), Expect = 1e-63
 Identities = 141/267 (52%), Positives = 179/267 (67%), Gaps = 4/267 (1%)
 Frame = -2

Query: 963 QEEILVEVSRTFGCKIYVDKTSNAEFYQALTLLSPEILSEDSSPRFHVFVGFPRLYERAK 784
           QE++L  VS TFG KI+VD+ +N E ++ALTL  PEIL++D S RFH+F GFP+LYERA 
Sbjct: 192 QEDVLAAVSETFGSKIFVDEVANTESFRALTLTVPEILTQDPSSRFHMFDGFPKLYERAA 251

Query: 783 AKIIEARANSQPDPLFIRPSTQWYACEEESMEIIDWQKKQRYNEAHKDAFGVWHVCYSMH 604
            KI EA+AN QP+PL IRPS QWYACEE   E  + Q+K R+NEA +D   VWHVCYSMH
Sbjct: 252 KKIAEAQANLQPEPLIIRPSAQWYACEEGYSE-TESQRKLRFNEAVRDPNSVWHVCYSMH 310

Query: 603 SSREELEWALQLLQPKRVVSTTPDCRAMELNYVRKQPSYGSKVASDDPLWKLLNIGSEVA 424
           SSR ELEWALQLL PK VVSTTP C AMEL+YV+K  S G+K+  DD LWKLL+I  E A
Sbjct: 311 SSRGELEWALQLLVPKWVVSTTPSCLAMELDYVKKHCS-GTKLTLDDRLWKLLDINVE-A 368

Query: 423 PTPSQVASCAASSSHQEDNPKPISAEEYKPQLNNIGSSSSSIEMR----LKLSRASTRPP 256
            + ++V +         + P  ISA+          S SS +++     L LS  S RP 
Sbjct: 369 SSETEVTARVLDYPSVVEQPIQISAQ----------SQSSPVKVTSRRLLSLSPPSKRPE 418

Query: 255 VTLFGRARQGLQNSGLLVKETKNISMK 175
           VTLFGRAR G+ +S +  K  +++S +
Sbjct: 419 VTLFGRARLGIPDSVVAHKMDQDVSFE 445


>ref|XP_002890312.1| hypothetical protein ARALYDRAFT_472127 [Arabidopsis lyrata subsp.
            lyrata] gi|297336154|gb|EFH66571.1| hypothetical protein
            ARALYDRAFT_472127 [Arabidopsis lyrata subsp. lyrata]
          Length = 547

 Score =  248 bits (633), Expect = 2e-63
 Identities = 149/306 (48%), Positives = 192/306 (62%), Gaps = 17/306 (5%)
 Frame = -2

Query: 963  QEEILVEVSRTFGCKIYVDKTSNAEFYQALTLLSPEILSEDSSPRFHVFVGFPRLYERAK 784
            QE++L+EVSRTFG KIYVDK +N E +++L ++ PEI+SED S RFH+F GFP+LYER  
Sbjct: 200  QEDVLLEVSRTFGSKIYVDKATNLECFRSLMVIVPEIVSEDPSSRFHIFSGFPKLYERTS 259

Query: 783  AKIIEARANSQPDPLFIRPSTQWYACEEESMEIIDW-------QKKQRYNEAHKDAFGVW 625
            AK+ EAR+  Q +PL IRPS QWY C++E     DW       Q+K R++EA KD FG+W
Sbjct: 260  AKLAEARSKLQSEPLIIRPSAQWYVCDDED----DWESGSIQKQRKVRFSEAVKDEFGLW 315

Query: 624  HVCYSMHSSREELEWALQLLQPKRVVSTTPDCRAMELNYVRKQPSYGSKVASDDPLWKLL 445
            HVCYSMHSSREELE A+QLL PK VVST P CRAMELNYV+K   + S+ + DDP WKLL
Sbjct: 316  HVCYSMHSSREELESAMQLLSPKWVVSTVPSCRAMELNYVKKN-CFISRFSPDDPFWKLL 374

Query: 444  NIGSEVAP-----TPSQVASCAASSSHQEDNPKPISAEEYKPQLNNIGSSSSSIEMRLKL 280
            +I  EV+P     T +   SC   S       + I  +  K +L  +  SSS+ +  L L
Sbjct: 375  DIDMEVSPVAAADTHTVALSCCLMS-------EEIILDSAKLKLEPVIESSSTKKKLLSL 427

Query: 279  SRASTRPPVTLFGRARQGLQNSGLL----VKETKNISMKTNPPNIFSSTKSEEKEII-LL 115
            S      PVTLFGRAR   Q S  L    V  T+ +  K++P       K   +E+I  L
Sbjct: 428  S-PEKNLPVTLFGRARLSSQESDQLHERKVIHTQCVFTKSSP----VLEKLNVQEVIESL 482

Query: 114  EDDSAE 97
            +DD+ E
Sbjct: 483  QDDTKE 488


Top