BLASTX nr result

ID: Papaver23_contig00033533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00033533
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncat...    66   3e-09
ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|35548...    64   1e-08
ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...    64   1e-08
ref|XP_002516807.1| ubiquitin-protein ligase, putative [Ricinus ...    59   4e-07
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    59   4e-07

>ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487555|gb|AES68758.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 382

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 42/135 (31%), Positives = 74/135 (54%), Gaps = 4/135 (2%)
 Frame = +1

Query: 46  GVCVYGVLHWIADRLSVSGTKAGVIVAFDIVEDRFFLEGLAHNLSPEFLGVLD-GELAML 222
           G  V G ++W+    S+       IV+FD+ ++ +        +SP  LG +D G+L++L
Sbjct: 230 GEFVSGTINWLFSEESLECPC--FIVSFDLAKESY------QKISPPNLGGVDVGDLSVL 281

Query: 223 CKVKGS---TVPGFDVWVMKEYPRKETWTRMYTLNTQNLVLAEPANLCPIHIFRNGEILL 393
             ++     T  G+DVW+MKEY  KE+WT+++T+           +   I++F + ++LL
Sbjct: 282 GVLRDCLCVTTSGYDVWLMKEYGNKESWTKLFTIPYMRDPSKPKVDARAIYVFEDDQVLL 341

Query: 394 EKDRDQKELVLYNPK 438
           + D D   L+LYNP+
Sbjct: 342 KYDFD-LNLILYNPR 355


>ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|355487558|gb|AES68761.1|
           F-box protein [Medicago truncatula]
          Length = 382

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
 Frame = +1

Query: 46  GVCVYGVLHWIADRLSVSGTKAGVIVAFDIVEDRFFLEGLAHNLSPEFLGVLD----GEL 213
           G  V G ++W+  +          IV+FD+ ++ +        +SP  LG +D      L
Sbjct: 229 GEFVSGTINWLFSKEQFWEYPC-FIVSFDLAKESY------QKISPPNLGGVDVCDLSAL 281

Query: 214 AMLCKVKGSTVPGFDVWVMKEYPRKETWTRMYTLNTQNLVLAEPANLCPIHIFRNGEILL 393
            +L      T  G+DVW+MKEY  KE+WT+++T++ +       A    I++F + ++LL
Sbjct: 282 GVLRDCLCVTTSGYDVWLMKEYGNKESWTKLFTISYKRHPSKFKAFAKAIYVFEDDQVLL 341

Query: 394 EKDRDQKELVLYNPKLDSVR 453
           E       LVLYNP+  +++
Sbjct: 342 ELYDSDLNLVLYNPRSGTLK 361


>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
 Frame = +1

Query: 43  LGVCVYGVLHWIADRLSVSGTKAGVIVAFDIVEDRFFLEGLAHNLSPEF---LGVLDGEL 213
           +GV V G LHW+  R  +      +IVAFD+  + F    L   +  +F   + +L G  
Sbjct: 200 MGVFVSGALHWVVTR-DLEPESRDLIVAFDLRFEVFREVALPGTVDGKFDMDVALLRG-- 256

Query: 214 AMLCKVKGSTVPGFDVWVMKEYPRKETWTRMYTLNTQNLVLAEPANLCPIHIFRNGEILL 393
            MLC ++     GFDVWVM+EY   ++W +M+T+  Q   +    +L P+   RNG+ +L
Sbjct: 257 -MLCIIENRGSDGFDVWVMREYGSHDSWCKMFTVG-QPRDVKLMKSLKPLGYSRNGDKVL 314

Query: 394 EKDRDQKELVLYN 432
             ++D K+L  YN
Sbjct: 315 -FEQDSKKLCWYN 326


>ref|XP_002516807.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223543895|gb|EEF45421.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 358

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
 Frame = +1

Query: 19  PYSNYGDQLGVCVYGVLHWIADRLSVSGTKAGVIVAFDIVEDRFF---LEGLAHNLSPEF 189
           PYS      G+ + G +HW+  R S   TK+ +I AFD+VE++F+        HN    F
Sbjct: 188 PYSILALDPGIQLNGAIHWVVSR-SKDSTKSQIIGAFDLVEEKFWDVPPPVSVHN----F 242

Query: 190 LGV-LDGELAMLCKVKGSTVPGF-DVWVMKEYPRKETWTRMYTLNTQNLVLAEPANLCPI 363
            G+ + GE   LC + GS V    D WVMK Y  +++WT++       ++      + P+
Sbjct: 243 YGIGVFGEC--LCILPGSDVTSHNDFWVMKRYGIRDSWTKV-------VINISYFRMKPL 293

Query: 364 HIFRNGEILLEKDRDQKELVLYN 432
            +F N + LLE D    +LVLY+
Sbjct: 294 GVFDNHKALLEID---GKLVLYS 313


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
 Frame = +1

Query: 19  PYS-NYGDQLGVCVYGVLHWIADRLSVSGTKAGVIVAFDIVEDRFFLEGLAHNLSPEF-- 189
           PY  +Y    GV   G LHW+      S   A ++VA D+      +E     L PE+  
Sbjct: 197 PYCVHYPGANGVFANGALHWVVGENPESNV-ANIVVALDLG-----VEDYREVLQPEYKD 250

Query: 190 ------LGVLDGELAMLCKVKGSTVPGFDVWVMKEYPRKETWTRMYTLNTQNLVLAEPAN 351
                 LGVL G L  L    G  V   DVW+MKEY  KE+WT+++++  Q  V+    +
Sbjct: 251 KNFYIDLGVLRGCLCFLANFLGERV---DVWMMKEYGVKESWTKLFSV-AQYEVIGFLRS 306

Query: 352 LCPIHIFRNG-EILLEKDRDQKELVLYNPKLDSVR 453
           L P+   ++G E+L+E   D  +L  Y+ K   V+
Sbjct: 307 LKPLAYSKSGDEVLIE--HDNLDLCWYDLKRKQVK 339


Top