BLASTX nr result

ID: Papaver23_contig00033385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00033385
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricin...    67   1e-09
ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata] gi...    66   3e-09
emb|CBI40152.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002303925.1| RNA polymerase IV subunit [Populus trichocar...    66   3e-09
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...    66   3e-09

>ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricinus communis]
           gi|223548071|gb|EEF49563.1| DNA-directed RNA polymerase,
           putative [Ricinus communis]
          Length = 991

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 25/34 (73%), Positives = 33/34 (97%)
 Frame = +1

Query: 289 DGHFGYIQLPIPVYHPTHLGELKRLLSIICLKCL 390
           +GHFGYI+LPIP+YHP+H+ ELKR+LS++CLKCL
Sbjct: 71  EGHFGYIELPIPIYHPSHVSELKRMLSLLCLKCL 104


>ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata]
           gi|297325678|gb|EFH56098.1| NRPD1b [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1947

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 24/34 (70%), Positives = 32/34 (94%)
 Frame = +1

Query: 289 DGHFGYIQLPIPVYHPTHLGELKRLLSIICLKCL 390
           +GHFGYIQLP+P+YHP H+ ELK++LS++CLKCL
Sbjct: 69  EGHFGYIQLPVPIYHPAHVNELKQMLSLLCLKCL 102


>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 25/34 (73%), Positives = 32/34 (94%)
 Frame = +1

Query: 289 DGHFGYIQLPIPVYHPTHLGELKRLLSIICLKCL 390
           +GHFGYI+LPIP+YHP H+ ELKR+LS++CLKCL
Sbjct: 68  EGHFGYIELPIPIYHPGHVSELKRMLSLLCLKCL 101


>ref|XP_002303925.1| RNA polymerase IV subunit [Populus trichocarpa]
           gi|222841357|gb|EEE78904.1| RNA polymerase IV subunit
           [Populus trichocarpa]
          Length = 924

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 25/34 (73%), Positives = 32/34 (94%)
 Frame = +1

Query: 289 DGHFGYIQLPIPVYHPTHLGELKRLLSIICLKCL 390
           +GHFG+I LPIP+YHP+H+ ELKR+LS+ICLKCL
Sbjct: 69  EGHFGFIHLPIPIYHPSHISELKRMLSLICLKCL 102


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 25/34 (73%), Positives = 32/34 (94%)
 Frame = +1

Query: 289 DGHFGYIQLPIPVYHPTHLGELKRLLSIICLKCL 390
           +GHFGYI+LPIP+YHP H+ ELKR+LS++CLKCL
Sbjct: 68  EGHFGYIELPIPIYHPGHVSELKRMLSLLCLKCL 101


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