BLASTX nr result

ID: Papaver23_contig00033281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00033281
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...   100   2e-19
ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumi...    77   1e-12
ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus ...    65   6e-09
ref|XP_002863254.1| hypothetical protein ARALYDRAFT_332995 [Arab...    62   4e-08
ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin...    61   8e-08

>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
           gi|147853333|emb|CAN82327.1| hypothetical protein
           VITISV_041807 [Vitis vinifera]
           gi|297740788|emb|CBI30970.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 57/121 (47%), Positives = 69/121 (57%)
 Frame = -1

Query: 364 YDMETMAGEAVDRSCGQLVELFIERFCRDQLLTYIADRCXXXXXXXXXSCQEVSFDXXXX 185
           YD+E MA  AVDRS GQL+ + I+ F  D LL YI DR          SC  +S D    
Sbjct: 77  YDLEEMARHAVDRSGGQLLSICIDDFATDNLLNYIIDRSSHIRHLRLVSCYGISDDGLSE 136

Query: 184 XXXXXXXXXXXXLCYCSFSGDKVDVLRTIGKACRQLKSFRLNCRGYRWRLVECDDEALAI 5
                       LCYCSFS +   VL  IG+ C +LKSFRLNC+G+R   +ECD+EALAI
Sbjct: 137 GIKRLPLLVEIDLCYCSFSKE---VLEAIGQCCPRLKSFRLNCQGFRHPHIECDEEALAI 193

Query: 4   A 2
           A
Sbjct: 194 A 194


>ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumis sativus]
           gi|449490588|ref|XP_004158648.1| PREDICTED: F-box
           protein SKIP19-like [Cucumis sativus]
          Length = 311

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 51/134 (38%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
 Frame = -1

Query: 400 IDMRWNLYEFDI-YDMETMAGEAVDRSCGQLVELFIERFCRDQLLTYIADRCXXXXXXXX 224
           IDMR+    +D+ Y++E +  +AV RSCGQL+   IE F  D LL YI   C        
Sbjct: 61  IDMRYPCDWWDMDYNLEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRLRL 120

Query: 223 XSCQEVSFDXXXXXXXXXXXXXXXXLCYCSFSGDKVDVLRTIGKACRQLKSFRLNCRGYR 44
             C  +S +                L +CSF    V+ L T+G+ C  LKS +LN + Y 
Sbjct: 121 VYCNRISDEGLVEAVSKLPLLEDLELSFCSFD---VETLETLGQNCPGLKSLKLNRQFY- 176

Query: 43  WRLVECDDEALAIA 2
            R VECD  ALAIA
Sbjct: 177 -RRVECDKGALAIA 189


>ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534044|gb|EEF35763.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 305

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 41/120 (34%), Positives = 59/120 (49%)
 Frame = -1

Query: 364 YDMETMAGEAVDRSCGQLVELFIERFCRDQLLTYIADRCXXXXXXXXXSCQEVSFDXXXX 185
           +D+E +   AVDRS G L+ + IE F  D L+ YIADR          S   +S      
Sbjct: 76  FDLEALCRNAVDRSRGGLISISIEYFATDSLIKYIADRSSHLKRLRLLSSYTLSDAAFSK 135

Query: 184 XXXXXXXXXXXXLCYCSFSGDKVDVLRTIGKACRQLKSFRLNCRGYRWRLVECDDEALAI 5
                       + YCS S    + L  +G +C  L+S +LNC+GY+   +E ++EALAI
Sbjct: 136 AAKKFPLLEELDISYCSLS---TEALVGVGISCPLLRSLKLNCQGYKRPHIESNEEALAI 192


>ref|XP_002863254.1| hypothetical protein ARALYDRAFT_332995 [Arabidopsis lyrata subsp.
           lyrata] gi|297309088|gb|EFH39513.1| hypothetical protein
           ARALYDRAFT_332995 [Arabidopsis lyrata subsp. lyrata]
          Length = 296

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/103 (34%), Positives = 51/103 (49%)
 Frame = -1

Query: 367 IYDMETMAGEAVDRSCGQLVELFIERFCRDQLLTYIADRCXXXXXXXXXSCQEVSFDXXX 188
           IYD E+M   AVDRS G LVE+ I  F  D LL YIADR           C +++ +   
Sbjct: 74  IYDFESMCRHAVDRSQGGLVEIDIWHFGTDDLLNYIADRSSNLRSLRLAMCNQITDEGVT 133

Query: 187 XXXXXXXXXXXXXLCYCSFSGDKVDVLRTIGKACRQLKSFRLN 59
                        + +C+F G+    LR +G++C  LK+ +LN
Sbjct: 134 EAVVKLPLLEDLDVSFCAFLGES---LRVVGQSCPNLKTLKLN 173


>ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 318

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/116 (31%), Positives = 53/116 (45%)
 Frame = -1

Query: 349 MAGEAVDRSCGQLVELFIERFCRDQLLTYIADRCXXXXXXXXXSCQEVSFDXXXXXXXXX 170
           M   A+D S G L+ + IE F  D LL +I              C ++S +         
Sbjct: 81  MCHRAIDYSSGHLLHINIEYFATDDLLRHITHSTSNLRSLRLACCYQISDEGLCEIAKEL 140

Query: 169 XXXXXXXLCYCSFSGDKVDVLRTIGKACRQLKSFRLNCRGYRWRLVECDDEALAIA 2
                  +   SF+  + D L  +G+ CR LK+ + N +GYR   +ECD+EA AIA
Sbjct: 141 PQLEELDISISSFNPTR-DPLEAVGRCCRHLKTLKFNMKGYRRPHIECDEEAFAIA 195


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