BLASTX nr result

ID: Papaver23_contig00033122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00033122
         (777 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16283.3| unnamed protein product [Vitis vinifera]              407   e-111
ref|XP_002284994.1| PREDICTED: general transcription factor IIH ...   407   e-111
ref|XP_002331276.1| predicted protein [Populus trichocarpa] gi|2...   391   e-107
ref|XP_003554116.1| PREDICTED: general transcription factor IIH ...   390   e-106
ref|XP_004169706.1| PREDICTED: general transcription factor IIH ...   386   e-105

>emb|CBI16283.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  407 bits (1047), Expect = e-111
 Identities = 182/223 (81%), Positives = 205/223 (91%)
 Frame = +3

Query: 3   TCDPGDVMETIKKCKRSKIRCSVIGLSAEVFVCKHLCQETGGSYTIALNEFHFKDLLLEH 182
           TCDPGD+METI++CK+SKIRCSVIGLSAE+F+C+HLCQETGGSY++AL+E HFK+LLLEH
Sbjct: 271 TCDPGDIMETIQECKKSKIRCSVIGLSAEIFICRHLCQETGGSYSVALDESHFKELLLEH 330

Query: 183 APPPPAIAEFAVGNLIKMGFPQRAAEGVVSICSCHKEAKVGGGYICPRCKARVCELPTEC 362
           APPPPAIAEFA+ NLIKMGFPQRAAEGV+SICSCHKEAKVGGGY CPRCKARVCELPTEC
Sbjct: 331 APPPPAIAEFAIANLIKMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARVCELPTEC 390

Query: 363 RICGLTLVSSPHLARSYHHLFPITPFEELSLALLNSSRHKLPKTCFGCQQSLVPSGNRPG 542
           RICGLTLVSSPHLARSYHHLFPI PF+E+SL+LLN+   +  + CFGCQ+SL+  GN+P 
Sbjct: 391 RICGLTLVSSPHLARSYHHLFPIPPFDEVSLSLLNNPHQRSSRACFGCQESLLIPGNKPT 450

Query: 543 LRVACPKCKQHFCLDCDIYIHESLHNCPGCESLRHSKTVNNIE 671
           L VACPKCKQHFCLDCDIYIHESLHNCPGCES RHSK V+  E
Sbjct: 451 LCVACPKCKQHFCLDCDIYIHESLHNCPGCESFRHSKIVSVTE 493


>ref|XP_002284994.1| PREDICTED: general transcription factor IIH subunit 2 [Vitis
           vinifera]
          Length = 433

 Score =  407 bits (1047), Expect = e-111
 Identities = 182/223 (81%), Positives = 205/223 (91%)
 Frame = +3

Query: 3   TCDPGDVMETIKKCKRSKIRCSVIGLSAEVFVCKHLCQETGGSYTIALNEFHFKDLLLEH 182
           TCDPGD+METI++CK+SKIRCSVIGLSAE+F+C+HLCQETGGSY++AL+E HFK+LLLEH
Sbjct: 210 TCDPGDIMETIQECKKSKIRCSVIGLSAEIFICRHLCQETGGSYSVALDESHFKELLLEH 269

Query: 183 APPPPAIAEFAVGNLIKMGFPQRAAEGVVSICSCHKEAKVGGGYICPRCKARVCELPTEC 362
           APPPPAIAEFA+ NLIKMGFPQRAAEGV+SICSCHKEAKVGGGY CPRCKARVCELPTEC
Sbjct: 270 APPPPAIAEFAIANLIKMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARVCELPTEC 329

Query: 363 RICGLTLVSSPHLARSYHHLFPITPFEELSLALLNSSRHKLPKTCFGCQQSLVPSGNRPG 542
           RICGLTLVSSPHLARSYHHLFPI PF+E+SL+LLN+   +  + CFGCQ+SL+  GN+P 
Sbjct: 330 RICGLTLVSSPHLARSYHHLFPIPPFDEVSLSLLNNPHQRSSRACFGCQESLLIPGNKPT 389

Query: 543 LRVACPKCKQHFCLDCDIYIHESLHNCPGCESLRHSKTVNNIE 671
           L VACPKCKQHFCLDCDIYIHESLHNCPGCES RHSK V+  E
Sbjct: 390 LCVACPKCKQHFCLDCDIYIHESLHNCPGCESFRHSKIVSVTE 432


>ref|XP_002331276.1| predicted protein [Populus trichocarpa] gi|222873701|gb|EEF10832.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score =  391 bits (1005), Expect = e-107
 Identities = 175/216 (81%), Positives = 196/216 (90%)
 Frame = +3

Query: 3   TCDPGDVMETIKKCKRSKIRCSVIGLSAEVFVCKHLCQETGGSYTIALNEFHFKDLLLEH 182
           TCDPGD+METI+KCK+SK+RCSVIGLSAE+F+CKHLCQETGG Y++AL+E HFK+L+LEH
Sbjct: 197 TCDPGDIMETIQKCKKSKMRCSVIGLSAEMFICKHLCQETGGLYSVALDESHFKELILEH 256

Query: 183 APPPPAIAEFAVGNLIKMGFPQRAAEGVVSICSCHKEAKVGGGYICPRCKARVCELPTEC 362
           APPPPAIAEFA+ NLIKMGFPQRAAEG +SICSCHKE+KVG GYICPRCKARVCELPTEC
Sbjct: 257 APPPPAIAEFAIANLIKMGFPQRAAEGSISICSCHKESKVGEGYICPRCKARVCELPTEC 316

Query: 363 RICGLTLVSSPHLARSYHHLFPITPFEELSLALLNSSRHKLPKTCFGCQQSLVPSGNRPG 542
           RICGLTLVSSPHLARSYHHLFPI PF+E+  +  N    +  KTCFGCQQSLV  GN+P 
Sbjct: 317 RICGLTLVSSPHLARSYHHLFPIAPFDEVKPSRQNEPHRRSQKTCFGCQQSLVNPGNKPS 376

Query: 543 LRVACPKCKQHFCLDCDIYIHESLHNCPGCESLRHS 650
           L+VACPKCKQ+FCLDCDIYIHESLHNCPGCESLR S
Sbjct: 377 LQVACPKCKQYFCLDCDIYIHESLHNCPGCESLRAS 412


>ref|XP_003554116.1| PREDICTED: general transcription factor IIH subunit 2-like [Glycine
           max]
          Length = 420

 Score =  390 bits (1002), Expect = e-106
 Identities = 170/219 (77%), Positives = 196/219 (89%)
 Frame = +3

Query: 3   TCDPGDVMETIKKCKRSKIRCSVIGLSAEVFVCKHLCQETGGSYTIALNEFHFKDLLLEH 182
           TCDPGD+METI+KCK+SKIRCSVIGL+AE+FVCKHLCQETGG+Y++AL+E HFK+L+LEH
Sbjct: 198 TCDPGDLMETIQKCKKSKIRCSVIGLAAEMFVCKHLCQETGGTYSVALDESHFKELILEH 257

Query: 183 APPPPAIAEFAVGNLIKMGFPQRAAEGVVSICSCHKEAKVGGGYICPRCKARVCELPTEC 362
           APPPPAIAE+A  NLIKMGFPQR+AEG V+IC+CH+EAK GGGY CPRCK RVCELPTEC
Sbjct: 258 APPPPAIAEYATANLIKMGFPQRSAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTEC 317

Query: 363 RICGLTLVSSPHLARSYHHLFPITPFEELSLALLNSSRHKLPKTCFGCQQSLVPSGNRPG 542
           R+CGLTL+SSPHLARSYHHLFPI  F+E++ +  N S H  P TCFGCQQSL+  GN+PG
Sbjct: 318 RVCGLTLISSPHLARSYHHLFPIVMFDEVTPSSQNDSNHSFPNTCFGCQQSLLSQGNKPG 377

Query: 543 LRVACPKCKQHFCLDCDIYIHESLHNCPGCESLRHSKTV 659
           L V CPKCKQ FCLDCDIY+HESLHNCPGCES RHSK+V
Sbjct: 378 LSVICPKCKQQFCLDCDIYVHESLHNCPGCESSRHSKSV 416


>ref|XP_004169706.1| PREDICTED: general transcription factor IIH subunit 2-like, partial
           [Cucumis sativus]
          Length = 329

 Score =  386 bits (992), Expect = e-105
 Identities = 171/225 (76%), Positives = 199/225 (88%), Gaps = 2/225 (0%)
 Frame = +3

Query: 3   TCDPGDVMETIKKCKRSKIRCSVIGLSAEVFVCKHLCQETGGSYTIALNEFHFKDLLLEH 182
           +CDPGD+MET++KCK SKIRCSVIGL+AE+F+C+HLCQETGGSY++AL+E HFK+LLLEH
Sbjct: 105 SCDPGDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETGGSYSVALDESHFKELLLEH 164

Query: 183 APPPPAIAEFAVGNLIKMGFPQRAAEGVVSICSCHKEAKVGGGYICPRCKARVCELPTEC 362
           APPPPAIA+ A+ NLIKMGFPQRAAE  ++ICSCHKEAKVGGGY CPRCKARVCELPTEC
Sbjct: 165 APPPPAIADSAMPNLIKMGFPQRAAESSIAICSCHKEAKVGGGYTCPRCKARVCELPTEC 224

Query: 363 RICGLTLVSSPHLARSYHHLFPITPFEELSLALLNSSRHKLPKTCFGCQQSLV--PSGNR 536
           RICGLTL+SSPHLARSYHHLFPI PF+E+S  + +  RH+LPK CFGCQ+SL+   +GN 
Sbjct: 225 RICGLTLISSPHLARSYHHLFPIIPFDEVSDKVFHDPRHQLPKVCFGCQESLMNPSTGNS 284

Query: 537 PGLRVACPKCKQHFCLDCDIYIHESLHNCPGCESLRHSKTVNNIE 671
           P +RV+CPKCKQHFCLDCDIYIHESLHNCPGCES R  K   + E
Sbjct: 285 PSIRVSCPKCKQHFCLDCDIYIHESLHNCPGCESFRRPKLATSDE 329


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