BLASTX nr result

ID: Papaver23_contig00033026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00033026
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   167   1e-39
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   164   1e-38
gb|AAD32950.1| putative non-LTR retroelement reverse transcripta...   158   1e-36
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   157   1e-36
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   157   2e-36

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  167 bits (424), Expect = 1e-39
 Identities = 81/214 (37%), Positives = 131/214 (61%)
 Frame = -2

Query: 664  FCKYIDQCISTTQISILLNGSPSTSFTPTRGIRQGDPLSPYLFIIGMEYLSRLLLNAETN 485
            + K +  C+++ + S+L+NG PS +F P+RG+RQGDPLSP+LF++  E LS LL +AE  
Sbjct: 611  YTKLVMNCVTSARFSVLVNGQPSRNFFPSRGLRQGDPLSPFLFVVCAEGLSTLLRDAEEK 670

Query: 484  QMISGVKAARNAPGITHLMFADDILIFTKADMHNIAGIMNVLDQFGKVSGQMLNLGKSSV 305
            ++I GVK       I+HL FADD L+F +A    +  +M++L  +   SGQ LN+ KS +
Sbjct: 671  KVIHGVKIGHRVSPISHLFFADDSLLFIRATEEEVENVMDILSTYEAASGQKLNMEKSEM 730

Query: 304  YFSNNIIPGARHDLAKELNMSEMLDTDKYLGVTLLLGRNKTKAFKPIMHSFGSRLKIWKG 125
             +S N+ P   + L  +L    +   +KYLG+   +G +K + F+ I      +LK WKG
Sbjct: 731  SYSRNLEPDKINTLQMKLAFKTVEGHEKYLGLPTFIGSSKKRVFQAIQDRVWKKLKGWKG 790

Query: 124  KTMNHSARSIMVKHVLNALSSHQMGSFRIPKNMI 23
            K ++ + R +++K V  A+ ++ M  F IPK++I
Sbjct: 791  KYLSQAGREVLIKAVAQAIPTYAMQCFVIPKSII 824


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score =  164 bits (415), Expect = 1e-38
 Identities = 80/215 (37%), Positives = 127/215 (59%)
 Frame = -2

Query: 658  KYIDQCISTTQISILLNGSPSTSFTPTRGIRQGDPLSPYLFIIGMEYLSRLLLNAETNQM 479
            ++I  C+ +   S++LNG       P RG+RQGDPLSPYLFII  E LS L+  AE +  
Sbjct: 1028 EWIMMCVESVDYSVILNGEKIGPIIPGRGLRQGDPLSPYLFIICAEGLSSLIRQAEGSGT 1087

Query: 478  ISGVKAARNAPGITHLMFADDILIFTKADMHNIAGIMNVLDQFGKVSGQMLNLGKSSVYF 299
            ISG K  +NAP I+HL+FADD  +F KA      G+ N+L+ +   SGQ +N  KS V++
Sbjct: 1088 ISGAKICKNAPIISHLLFADDCFLFFKAKSGQAQGMKNILEMYESSSGQSINFQKSEVFY 1147

Query: 298  SNNIIPGARHDLAKELNMSEMLDTDKYLGVTLLLGRNKTKAFKPIMHSFGSRLKIWKGKT 119
            S N+    +  +++ L + +++ T KYLGV  ++GR++   FK +      ++  W  K 
Sbjct: 1148 SRNVDDAVKASISQILGVQQVMGTGKYLGVPSMVGRSRISTFKFVKERVWKKINSWSSKC 1207

Query: 118  MNHSARSIMVKHVLNALSSHQMGSFRIPKNMIAQM 14
            ++ + R  ++K VL ++  + M  F IPK++I  +
Sbjct: 1208 LSQAGRETLIKSVLQSIPFYIMSIFAIPKSIIVDI 1242


>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 773

 Score =  158 bits (399), Expect = 1e-36
 Identities = 78/219 (35%), Positives = 128/219 (58%)
 Frame = -2

Query: 664 FCKYIDQCISTTQISILLNGSPSTSFTPTRGIRQGDPLSPYLFIIGMEYLSRLLLNAETN 485
           +C +I  CI+TT  SIL+NG P     P RGIRQGDP+SPYL+++  E LS L+  +   
Sbjct: 57  WCNWIMTCITTTTYSILINGQPVRRIIPKRGIRQGDPISPYLYLLCTEGLSALIQASIKA 116

Query: 484 QMISGVKAARNAPGITHLMFADDILIFTKADMHNIAGIMNVLDQFGKVSGQMLNLGKSSV 305
           + + G KA+RN P I+HL+FA D L+F KA +     ++NVL  + K SGQ +N  KS++
Sbjct: 117 KQLHGFKASRNGPAISHLLFAHDSLVFCKATLEECMTLVNVLKLYEKASGQAVNFQKSAI 176

Query: 304 YFSNNIIPGARHDLAKELNMSEMLDTDKYLGVTLLLGRNKTKAFKPIMHSFGSRLKIWKG 125
            F   +       L++ L + +     +YLG+   +GRNKT AF  I  +   ++  W  
Sbjct: 177 LFGKGLDFRTSEQLSQLLGIYKTEGFGRYLGLPEFVGRNKTNAFSFIAQTMDQKMDNWYN 236

Query: 124 KTMNHSARSIMVKHVLNALSSHQMGSFRIPKNMIAQMNT 8
           K ++ + + +++K ++ A+ ++ M  F +P  +I Q+ +
Sbjct: 237 KLLSPAGKEVLIKSIVTAIPTYSMSCFLLPMRLIHQITS 275


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  157 bits (398), Expect = 1e-36
 Identities = 81/223 (36%), Positives = 124/223 (55%), Gaps = 4/223 (1%)
 Frame = -2

Query: 664  FCK----YIDQCISTTQISILLNGSPSTSFTPTRGIRQGDPLSPYLFIIGMEYLSRLLLN 497
            FC+    +I  CI+T Q  +L+NG P     P RG+RQGDPLSPYLFI+  E L   +  
Sbjct: 382  FCEKWISWIMWCITTVQYKVLINGQPKGLIIPERGLRQGDPLSPYLFILCTEVLIANIRK 441

Query: 496  AETNQMISGVKAARNAPGITHLMFADDILIFTKADMHNIAGIMNVLDQFGKVSGQMLNLG 317
            AE   +I+G+K A  +P ++HL+FADD L F KA+      I+ +L Q+  VSGQ +N  
Sbjct: 442  AERQNLITGIKVATPSPAVSHLLFADDSLFFCKANKEQCGIILEILKQYESVSGQQINFS 501

Query: 316  KSSVYFSNNIIPGARHDLAKELNMSEMLDTDKYLGVTLLLGRNKTKAFKPIMHSFGSRLK 137
            KSS+ F + +    + D+   L +  +     YLG+   LG +KTK F  +     SR+ 
Sbjct: 502  KSSIQFGHKVEDSIKADIKLILGIHNLGGMGSYLGLPESLGGSKTKVFSFVRDRLQSRIN 561

Query: 136  IWKGKTMNHSARSIMVKHVLNALSSHQMGSFRIPKNMIAQMNT 8
             W  K ++   + +M+K V   L  + M  FR+PK + +++ +
Sbjct: 562  GWSAKFLSKGGKEVMIKSVAATLPRYVMSCFRLPKAITSKLTS 604


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  157 bits (397), Expect = 2e-36
 Identities = 75/212 (35%), Positives = 132/212 (62%)
 Frame = -2

Query: 643  CISTTQISILLNGSPSTSFTPTRGIRQGDPLSPYLFIIGMEYLSRLLLNAETNQMISGVK 464
            C++T   S ++NG    S TP+RG+RQGDPLSP+LFI+  +  S+++     ++ I G K
Sbjct: 616  CVATVSYSFIINGRVCGSVTPSRGLRQGDPLSPFLFILVADAFSQMVKQKVVSKEIHGAK 675

Query: 463  AARNAPGITHLMFADDILIFTKADMHNIAGIMNVLDQFGKVSGQMLNLGKSSVYFSNNII 284
            A+RN P I+HL+FADD L+FT+A       I+++L+++   SGQ +N  KS V FS  + 
Sbjct: 676  ASRNGPEISHLLFADDSLLFTRATRQECLTIVDILNKYEAASGQKINYEKSEVSFSRGVS 735

Query: 283  PGARHDLAKELNMSEMLDTDKYLGVTLLLGRNKTKAFKPIMHSFGSRLKIWKGKTMNHSA 104
               + +L   L+M ++    KYLG+  L GR+K   F+ ++     +L+ WK K ++ + 
Sbjct: 736  CEKKEELITLLHMRQVDRHQKYLGIPALCGRSKKVLFRELLDRMWKKLRGWKEKLLSRAG 795

Query: 103  RSIMVKHVLNALSSHQMGSFRIPKNMIAQMNT 8
            + +++K V+ AL ++ MG +++P  +I ++++
Sbjct: 796  KEVLIKAVIQALPTYLMGVYKLPVAVIQEIHS 827


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