BLASTX nr result

ID: Papaver23_contig00032954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00032954
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_190281.1| alpha-glucan phosphorylase isozyme H [Arabidops...    57   2e-06
ref|XP_002877534.1| alpha-glucan phosphorylase 2 [Arabidopsis ly...    57   2e-06
ref|XP_002313399.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
gb|AAL10498.1| AT3g46970/F13I12_20 [Arabidopsis thaliana]              57   2e-06
gb|AFK40784.1| unknown [Lotus japonicus]                               56   6e-06

>ref|NP_190281.1| alpha-glucan phosphorylase isozyme H [Arabidopsis thaliana]
            gi|14916634|sp|Q9SD76.1|PHS2_ARATH RecName:
            Full=Alpha-glucan phosphorylase 2, cytosolic;
            Short=AtPHS2; AltName: Full=Alpha-glucan phosphorylase, H
            isozyme; AltName: Full=Starch phosphorylase H
            gi|6522578|emb|CAB61943.1| starch phosphorylase H
            (cytosolic form)-like protein [Arabidopsis thaliana]
            gi|19699065|gb|AAL90900.1| AT3g46970/F13I12_20
            [Arabidopsis thaliana] gi|27764912|gb|AAO23577.1|
            At3g46970/F13I12_20 [Arabidopsis thaliana]
            gi|332644704|gb|AEE78225.1| alpha-glucan phosphorylase
            isozyme H [Arabidopsis thaliana]
          Length = 841

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 54/163 (33%), Positives = 68/163 (41%), Gaps = 37/163 (22%)
 Frame = +2

Query: 2    YNVSVAEMLIPGSD-----STADMHASGSNNIYFY*M------------------VVSYS 112
            YNV+VAEMLIPGS+     STA M ASG++N+ F                     V   +
Sbjct: 655  YNVTVAEMLIPGSELSQHISTAGMEASGTSNMKFALNGCLIIGTLDGANVEIREEVGEEN 714

Query: 113  KH*MGWCTD-----KKGNRKSMLKMSPNFVRIYIMGCSRLVSVSNICPSGTCGSYDYSQL 277
                G   D     +K     + K  P F                   SG  GSYDY  L
Sbjct: 715  FFLFGATADQVPRLRKEREDGLFKPDPRFEE-----------AKQFVKSGVFGSYDYGPL 763

Query: 278  LD*LEGNMD*GQGD---------SCMDSENKVDDDYK*KQSQL 379
            LD LEGN   G+GD         S MD++ KVD+ YK ++  L
Sbjct: 764  LDSLEGNTGFGRGDYFLVGYDFPSYMDAQAKVDEAYKDRKGWL 806


>ref|XP_002877534.1| alpha-glucan phosphorylase 2 [Arabidopsis lyrata subsp. lyrata]
            gi|297323372|gb|EFH53793.1| alpha-glucan phosphorylase 2
            [Arabidopsis lyrata subsp. lyrata]
          Length = 841

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 54/163 (33%), Positives = 68/163 (41%), Gaps = 37/163 (22%)
 Frame = +2

Query: 2    YNVSVAEMLIPGSD-----STADMHASGSNNIYFY*M------------------VVSYS 112
            YNV+VAEMLIPGS+     STA M ASG++N+ F                     V   +
Sbjct: 655  YNVTVAEMLIPGSELSQHISTAGMEASGTSNMKFALNGCLIIGTLDGANVEIREEVGEEN 714

Query: 113  KH*MGWCTD-----KKGNRKSMLKMSPNFVRIYIMGCSRLVSVSNICPSGTCGSYDYSQL 277
                G   D     +K     + K  P F                   SG  GSYDY  L
Sbjct: 715  FFLFGATADQVPRLRKEREDGLFKPDPRFEE-----------AKQFVKSGVFGSYDYGPL 763

Query: 278  LD*LEGNMD*GQGD---------SCMDSENKVDDDYK*KQSQL 379
            LD LEGN   G+GD         S MD++ KVD+ YK ++  L
Sbjct: 764  LDSLEGNTGFGRGDYFLVGYDFPSYMDAQAKVDEAYKDRKGWL 806


>ref|XP_002313399.1| predicted protein [Populus trichocarpa] gi|222849807|gb|EEE87354.1|
            predicted protein [Populus trichocarpa]
          Length = 853

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 53/159 (33%), Positives = 70/159 (44%), Gaps = 39/159 (24%)
 Frame = +2

Query: 2    YNVSVAEMLIPGSD-----STADMHASGSNNIYFY*M------------------VVSYS 112
            YNVSVAEMLIPGS+     STA M ASG++N+ F                     +   +
Sbjct: 667  YNVSVAEMLIPGSELSQHISTAGMEASGTSNMKFALNGCLIIGTLDGANVEIREEIGEEN 726

Query: 113  KH*MGWCTD-----KKGNRKSMLKMSPNF--VRIYIMGCSRLVSVSNICPSGTCGSYDYS 271
                G   D     +K     + K  P F   ++YI              SG  GSYDY+
Sbjct: 727  FFLFGATADEVPRLRKERENGLFKPDPRFEEAKMYIR-------------SGAFGSYDYN 773

Query: 272  QLLD*LEGNMD*GQGD---------SCMDSENKVDDDYK 361
             LL+ LEGN   G+GD         S MD++ +VD+ YK
Sbjct: 774  PLLESLEGNSGYGRGDYFLVGHDFPSYMDAQERVDEAYK 812


>gb|AAL10498.1| AT3g46970/F13I12_20 [Arabidopsis thaliana]
          Length = 841

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 54/163 (33%), Positives = 68/163 (41%), Gaps = 37/163 (22%)
 Frame = +2

Query: 2    YNVSVAEMLIPGSD-----STADMHASGSNNIYFY*M------------------VVSYS 112
            YNV+VAEMLIPGS+     STA M ASG++N+ F                     V   +
Sbjct: 655  YNVTVAEMLIPGSELSQHISTAGMEASGTSNMKFALNGCLIIGTLDGANVEIREEVGEEN 714

Query: 113  KH*MGWCTD-----KKGNRKSMLKMSPNFVRIYIMGCSRLVSVSNICPSGTCGSYDYSQL 277
                G   D     +K     + K  P F                   SG  GSYDY  L
Sbjct: 715  FFLFGATADQVPRLRKEREDGLFKPDPRFEE-----------AKQFVKSGVFGSYDYGPL 763

Query: 278  LD*LEGNMD*GQGD---------SCMDSENKVDDDYK*KQSQL 379
            LD LEGN   G+GD         S MD++ KVD+ YK ++  L
Sbjct: 764  LDSLEGNTGFGRGDYFLVGYDFPSYMDAQAKVDEAYKDRKGWL 806


>gb|AFK40784.1| unknown [Lotus japonicus]
          Length = 272

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 49/152 (32%), Positives = 69/152 (45%), Gaps = 26/152 (17%)
 Frame = +2

Query: 2   YNVSVAEMLIPGSD-----STADMHASGSNNIYFY*---MVVSYSKH*MGWCTDKKGNRK 157
           YNV+VAE+LIPGS+     STA M ASG++N+ F     +++           ++ G   
Sbjct: 86  YNVTVAEVLIPGSELSQHISTAGMEASGTSNMKFALNGCLIIGTLDGANVEIREEVGEEN 145

Query: 158 SML---------KMSPNFVRIYIMGCSRLVSVSNICPSGTCGSYDYSQLLD*LEGNMD*G 310
             L         ++             R         SG  GSYDY+ LLD LEGN   G
Sbjct: 146 FFLFGATAEDVPRLRKERENGLFKPDPRFEEAKKFIRSGVFGSYDYNPLLDSLEGNSGYG 205

Query: 311 QGD---------SCMDSENKVDDDYK*KQSQL 379
           +GD         S MD++ KVD+ Y+ K+  L
Sbjct: 206 RGDYFLVGYDFPSYMDAQEKVDEAYRDKKRWL 237


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