BLASTX nr result

ID: Papaver23_contig00032950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00032950
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containi...   195   6e-48
ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containi...   186   4e-45
ref|XP_002528356.1| pentatricopeptide repeat-containing protein,...   180   2e-43
ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containi...   161   1e-37
ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containi...   160   2e-37

>ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
           [Vitis vinifera]
          Length = 590

 Score =  195 bits (495), Expect = 6e-48
 Identities = 103/160 (64%), Positives = 124/160 (77%), Gaps = 1/160 (0%)
 Frame = -1

Query: 479 DPRCIHAQAIKSETKASKHRFLFNELITHYSKSNKLLYAQRVFNQ-IPEPNVVSWTSLIS 303
           +PR IHAQAIKS   A   R  +N LIT YSKSN L  A R+F+  IP PNVVSWT+LIS
Sbjct: 31  NPRLIHAQAIKS---AITDRSFYNSLITLYSKSNLLSKAVRIFHHHIPSPNVVSWTALIS 87

Query: 302 SYINTSNAFHHFISMIRHPTLPNQRTLAPLFKTCASLSALQIGIQLHSISLKLSLSNLCY 123
           +Y +TS A  HFISM+RHPTLPNQRTLA L KTCASL +L  G+QLHS+SLKLSLS   +
Sbjct: 88  AYASTSFALLHFISMLRHPTLPNQRTLASLLKTCASLPSLSFGLQLHSLSLKLSLSAQPF 147

Query: 122 TGSSLISFYTKCSLPNEALKVFDKILERDEVCYSSMIVGL 3
             S+L++FY+KC LP EA +VFD+I ERDEVC+++MIVGL
Sbjct: 148 VSSALVNFYSKCRLPLEACRVFDEITERDEVCFAAMIVGL 187


>ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
           gi|449487598|ref|XP_004157706.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 583

 Score =  186 bits (471), Expect = 4e-45
 Identities = 91/159 (57%), Positives = 120/159 (75%)
 Frame = -1

Query: 479 DPRCIHAQAIKSETKASKHRFLFNELITHYSKSNKLLYAQRVFNQIPEPNVVSWTSLISS 300
           DPR  HAQAIKS         ++N LIT YSK+N L Y+ R+FNQIP P++VSWT+LIS+
Sbjct: 28  DPRIDHAQAIKSPATEC---VVYNNLITRYSKANLLHYSARLFNQIPFPDIVSWTALISA 84

Query: 299 YINTSNAFHHFISMIRHPTLPNQRTLAPLFKTCASLSALQIGIQLHSISLKLSLSNLCYT 120
           + +T  +  HF+SM+R+PT PN+RTLAPLFKTCASL  +  G  LHS++ KLSL N  Y+
Sbjct: 85  HSSTFLSLRHFVSMLRYPTFPNERTLAPLFKTCASLPCVSFGFALHSLAYKLSLCNGPYS 144

Query: 119 GSSLISFYTKCSLPNEALKVFDKILERDEVCYSSMIVGL 3
           GS+L++FY+KC L N+A KVFD+I  RDE CYS+++VGL
Sbjct: 145 GSALVNFYSKCRLFNDACKVFDEISYRDEFCYSALVVGL 183


>ref|XP_002528356.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532224|gb|EEF34028.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 356

 Score =  180 bits (457), Expect = 2e-43
 Identities = 93/163 (57%), Positives = 119/163 (73%), Gaps = 4/163 (2%)
 Frame = -1

Query: 479 DPRCIHAQAIKSE-TKASKHRFLFNELITHYSKSNKLL---YAQRVFNQIPEPNVVSWTS 312
           DPR +HAQAIKS  T  S     FN LIT YS+S   L   YA R+F+ +P PN+VSWTS
Sbjct: 10  DPRILHAQAIKSPYTNLS----CFNHLITLYSRSPNFLVFSYANRLFSLLPSPNIVSWTS 65

Query: 311 LISSYINTSNAFHHFISMIRHPTLPNQRTLAPLFKTCASLSALQIGIQLHSISLKLSLSN 132
           LIS++ ++  + HHF+SM+R P LPNQRTLA LFK C +LSAL  G  LHS++LKLSL  
Sbjct: 66  LISAHTHSFLSLHHFLSMLRRPILPNQRTLASLFKACTNLSALSFGFSLHSMALKLSLDT 125

Query: 131 LCYTGSSLISFYTKCSLPNEALKVFDKILERDEVCYSSMIVGL 3
             ++GS+L++FY+KC LP  A KVFD++ ERDEVCY ++IVGL
Sbjct: 126 QPFSGSALVNFYSKCRLPENARKVFDEMPERDEVCYGALIVGL 168


>ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 561

 Score =  161 bits (407), Expect = 1e-37
 Identities = 82/160 (51%), Positives = 116/160 (72%), Gaps = 1/160 (0%)
 Frame = -1

Query: 479 DPRCIHAQAIKSETKASKHRFLFNELITHYSKSNKLLYAQRVFNQIP-EPNVVSWTSLIS 303
           DPR  HA+AI S    +K R ++N LITHYSKSN   YA  +F+++P  PNVVSWT+LIS
Sbjct: 18  DPRVRHARAITSH---AKDRAVWNNLITHYSKSNLSSYAVSLFHRLPFPPNVVSWTALIS 74

Query: 302 SYINTSNAFHHFISMIRHPTLPNQRTLAPLFKTCASLSALQIGIQLHSISLKLSLSNLCY 123
           ++ NT  +  HF++M+RH TLPN RTLA LF TCA+L+A+   + LHS++LKL+L++  +
Sbjct: 75  AHSNTLLSLRHFLAMLRHNTLPNHRTLASLFATCAALTAVSFALSLHSLALKLALAHHPF 134

Query: 122 TGSSLISFYTKCSLPNEALKVFDKILERDEVCYSSMIVGL 3
             SSL+S Y K  +P+ A KVFD+I + D VC+S+++V L
Sbjct: 135 PASSLLSVYAKLRMPHNARKVFDEIPQPDNVCFSALVVAL 174


>ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 561

 Score =  160 bits (404), Expect = 2e-37
 Identities = 84/160 (52%), Positives = 112/160 (70%), Gaps = 1/160 (0%)
 Frame = -1

Query: 479 DPRCIHAQAIKSETKASKHRFLFNELITHYSKSNKLLYAQRVFNQIP-EPNVVSWTSLIS 303
           DPR  HAQAI S  K    R ++N LITHYSKS+   YA  +F ++P  PNVVSWT+LIS
Sbjct: 18  DPRARHAQAITSHIK---DRAVWNNLITHYSKSDLSSYAVSLFQRLPFPPNVVSWTALIS 74

Query: 302 SYINTSNAFHHFISMIRHPTLPNQRTLAPLFKTCASLSALQIGIQLHSISLKLSLSNLCY 123
           ++ NT  +  HF++M+RH TLPN RT+A LF TCA+L+A+   + LHS++LKLSLS   +
Sbjct: 75  AHSNTLLSLRHFLAMLRHNTLPNHRTVASLFTTCAALTAVSFALSLHSLALKLSLSQHPF 134

Query: 122 TGSSLISFYTKCSLPNEALKVFDKILERDEVCYSSMIVGL 3
             SSL+S Y K  +P  A KVFD+I + D VC+S++IV L
Sbjct: 135 PASSLLSLYAKLRMPLNARKVFDEIPQPDNVCFSALIVAL 174



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 43/158 (27%), Positives = 86/158 (54%), Gaps = 4/158 (2%)
 Frame = -1

Query: 467 IHAQAIKSETKASKHRFLFNELITHYSKSNKLLYAQRVFNQIPEPNVVSWTSLISSYINT 288
           +H+ A+K     S+H F  + L++ Y+K    L A++VF++IP+P+ V +++LI +    
Sbjct: 120 LHSLALK--LSLSQHPFPASSLLSLYAKLRMPLNARKVFDEIPQPDNVCFSALIVALAQN 177

Query: 287 S---NAFHHFISMIRHPTLPNQRTLAPLFKTCASLSALQIGIQLHSISLKLSLSNLCYTG 117
           S   +A   F  M          +++ + +  A L+AL+    +H+ ++ L L +    G
Sbjct: 178 SRSVDASSVFSEMRGRGFASTVHSVSGVLRAAAQLAALEQCRMMHAHAVVLGLDSNVVVG 237

Query: 116 SSLISFYTKCSLPNEALKVF-DKILERDEVCYSSMIVG 6
           S+L+  Y K  + N+A +VF D + + + V +++M+ G
Sbjct: 238 SALVDGYGKAGVVNDARRVFEDNLDDMNVVGWNAMMAG 275


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