BLASTX nr result

ID: Papaver23_contig00032947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00032947
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...   121   1e-25
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...   119   6e-25
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   117   2e-24
gb|AAM08561.1|AC092749_14 Putative retroelement [Oryza sativa Ja...   107   1e-21
ref|NP_001176100.1| Os10g0351414 [Oryza sativa Japonica Group] g...   107   1e-21

>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score =  121 bits (304), Expect = 1e-25
 Identities = 70/205 (34%), Positives = 109/205 (53%), Gaps = 2/205 (0%)
 Frame = -1

Query: 643  VPSVVIAKGLAIAWHNSIEMKLI-SSKFSVFRFDSKIRDTEVI-ITCVYGAVEADDKIEQ 470
            V  +   +GLA+ W +++++ ++ SS   V    S + D  V  IT +YG    ++K   
Sbjct: 663  VDPIATGRGLALFWGDAVQVSILDSSPNYVDTVVSFLSDAFVCKITWMYGNPHDNEKRAF 722

Query: 469  *TYISDMAQQINKPWVLIGDLNVILDPDEKQGGNKAGSSSKSFIVNTIDSLGLIDTGYDG 290
               +       + PW+++GD N +LDP EK GG            + +++  L D  + G
Sbjct: 723  WRLMYSRFPVQSLPWLVLGDFNEVLDPSEKWGGGPPLPWRIKLFRDFLNNGHLRDLHFKG 782

Query: 289  SPFTWSNNRKGEANISERIDRALTSFMWSQNFPNTKVTHLPRVGSDHTPILLDSNPENSK 110
              F+W   R G   I ER+DRAL +  WS + PNT++ HLP++GSDH P+LLDSNP+   
Sbjct: 783  PGFSWFAMRHGRVFIKERLDRALGNIAWSSSQPNTQILHLPKIGSDHRPLLLDSNPKMLN 842

Query: 109  LQKPFRCLRSWLTHCTLSTVVEASW 35
              + FR  + W TH   S V++ SW
Sbjct: 843  KTRLFRFEQMWTTHEEYSDVIQRSW 867


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score =  119 bits (297), Expect = 6e-25
 Identities = 61/179 (34%), Positives = 95/179 (53%)
 Frame = -1

Query: 562 SVFRFDSKIRDTEVIITCVYGAVEADDKIEQ*TYISDMAQQINKPWVLIGDLNVILDPDE 383
           ++F+  S I   EV++T ++      ++ +    +++ +     PW++ GD+N +L  +E
Sbjct: 91  ALFKLRSDI--PEVLLTGMHAPSVVSERNKYWVDLTEDSPPRGTPWLVAGDMNEVLHGNE 148

Query: 382 KQGGNKAGSSSKSFIVNTIDSLGLIDTGYDGSPFTWSNNRKGEANISERIDRALTSFMWS 203
           K GG + G        + I +  L+D G+ G  FTW+N R G + I ER+DRAL +  W 
Sbjct: 149 KMGGRQVGKEQGKQCKDWIAANALLDLGFQGPKFTWTNGRTGGSLIKERLDRALVNSEWL 208

Query: 202 QNFPNTKVTHLPRVGSDHTPILLDSNPENSKLQKPFRCLRSWLTHCTLSTVVEASWKLH 26
             FP+TKV HLPR  SDH P+L+  N        PFRC   W  H   + V+E +W  H
Sbjct: 209 DLFPDTKVIHLPRTFSDHCPLLILFNENPRSESFPFRCKEVWAYHPDFTNVIEETWGSH 267


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  117 bits (293), Expect = 2e-24
 Identities = 69/213 (32%), Positives = 111/213 (52%), Gaps = 8/213 (3%)
 Frame = -1

Query: 619 GLAIAWHNSIEMKLISSKFSVFRFDSKIRDT---EVIITCVYGAVEADDKIEQ*TYISDM 449
           GLA+ W + I+++++S   S    D  + +    E   T +YG  E + K +    +S +
Sbjct: 72  GLAMLWRSEIKVQVMS--MSSNHIDIVVGEEAQGEWRFTGIYGYPEEEHKDKTGALLSAL 129

Query: 448 AQQINKPWVLIGDLNVILDPDEKQGGNKAGSSSKSFIVNTIDSLGLIDTGYDGSPFTWSN 269
           A+   +PW+  GD N++L   EK+GG+   S       N ++    +D G+ G  FTW+N
Sbjct: 130 ARASRRPWLCGGDFNLMLVASEKKGGDGFNSREADIFRNAMEECHFMDLGFVGYEFTWTN 189

Query: 268 NRKGEANISERIDRALTSFMWSQNFPNTKVTHLPRVGSDHTPIL-----LDSNPENSKLQ 104
           NR G+ANI ER+DR + + +W   FP + V+HLP+  SDH PI+       S    +K  
Sbjct: 190 NRGGDANIQERLDRFVANDLWKIKFPGSFVSHLPKRKSDHVPIVASVKGAQSAATRTKKS 249

Query: 103 KPFRCLRSWLTHCTLSTVVEASWKLHSENSGVN 5
           K FR    WL       VV+ +W +   ++G+N
Sbjct: 250 KRFRFEAMWLREGESDEVVKETW-MRGTDAGIN 281


>gb|AAM08561.1|AC092749_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1739

 Score =  107 bits (268), Expect = 1e-21
 Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 3/206 (1%)
 Frame = -1

Query: 643  VPSVVIAKGLAIAWHNSIEMKLISSKFSVFRFDSKIRDTEVI--ITCVYGAVEADDKIEQ 470
            VP    + GL + W   +++ ++ S  +        +++  I  + C+YG          
Sbjct: 828  VPVDQASGGLWLMWDEDMDLTIVQSSINYILAYGVYKNSGPIFNLLCIYGDPSHRATSAM 887

Query: 469  *TYISD-MAQQINKPWVLIGDLNVILDPDEKQGGNKAGSSSKSFIVNTIDSLGLIDTGYD 293
             + IS  +    +KP   +GDLN I+  +EK G      +  +   + +++LGL+D GY+
Sbjct: 888  WSEISSFVVHSSHKPTFCMGDLNEIMHANEKYGLAPPNQNRINIFKHHVNNLGLMDMGYN 947

Query: 292  GSPFTWSNNRKGEANISERIDRALTSFMWSQNFPNTKVTHLPRVGSDHTPILLDSNPENS 113
            G  +TWSN ++G+  + ER+DR L +  W  N+PNT V HLP + SDH PI+   NP+N 
Sbjct: 948  GPAYTWSNKQQGKDLVLERLDRCLANVEWCFNYPNTTVYHLPMLYSDHAPIIAILNPKNR 1007

Query: 112  KLQKPFRCLRSWLTHCTLSTVVEASW 35
            + ++ F     WL     +    ++W
Sbjct: 1008 RPKRSFMFENWWLLEPDFNQHAHSAW 1033


>ref|NP_001176100.1| Os10g0351414 [Oryza sativa Japonica Group]
           gi|255679325|dbj|BAH94828.1| Os10g0351414 [Oryza sativa
           Japonica Group]
          Length = 912

 Score =  107 bits (268), Expect = 1e-21
 Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 3/206 (1%)
 Frame = -1

Query: 643 VPSVVIAKGLAIAWHNSIEMKLISSKFSVFRFDSKIRDTEVI--ITCVYGAVEADDKIEQ 470
           VP    + GL + W   +++ ++ S  +        +++  I  + C+YG          
Sbjct: 52  VPVDQASGGLWLMWDEDMDLTIVQSSINYILAYGVYKNSGPIFNLLCIYGDPSHRATSAM 111

Query: 469 *TYISD-MAQQINKPWVLIGDLNVILDPDEKQGGNKAGSSSKSFIVNTIDSLGLIDTGYD 293
            + IS  +    +KP   +GDLN I+  +EK G      +  +   + +++LGL+D GY+
Sbjct: 112 WSEISSFVVHSSHKPTFCMGDLNEIMHANEKYGLAPPNQNRINIFKHHVNNLGLMDMGYN 171

Query: 292 GSPFTWSNNRKGEANISERIDRALTSFMWSQNFPNTKVTHLPRVGSDHTPILLDSNPENS 113
           G  +TWSN ++G+  + ER+DR L +  W  N+PNT V HLP + SDH PI+   NP+N 
Sbjct: 172 GPAYTWSNKQQGKDLVLERLDRCLANVEWCFNYPNTTVYHLPMLYSDHAPIIAILNPKNR 231

Query: 112 KLQKPFRCLRSWLTHCTLSTVVEASW 35
           + ++ F     WL     +    ++W
Sbjct: 232 RPKRSFMFENWWLLEPDFNQHAHSAW 257


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