BLASTX nr result

ID: Papaver23_contig00032896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00032896
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518705.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...   133   1e-29
ref|XP_002282447.2| PREDICTED: E3 ubiquitin-protein ligase MARCH...   133   2e-29
emb|CBI32382.3| unnamed protein product [Vitis vinifera]              133   2e-29
ref|XP_002298731.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-29
ref|XP_002518729.1| ssm4 protein, putative [Ricinus communis] gi...   132   3e-29

>ref|XP_003518705.1| PREDICTED: E3 ubiquitin-protein ligase MARCH6-like [Glycine max]
          Length = 1123

 Score =  133 bits (335), Expect = 1e-29
 Identities = 83/197 (42%), Positives = 108/197 (54%), Gaps = 29/197 (14%)
 Frame = -1

Query: 509  SSCVYDVITLLTGYMVVLPLVCAAFDIP------------------IRTVASKIRHYLRK 384
            +S + DV TL  GY+ +L L+   F I                   I ++A  I    R+
Sbjct: 466  TSRISDVTTLAIGYVFILTLIFCYFGIVALIRYTKGEPLTMGRFYGIASIAETIPSLFRQ 525

Query: 383  FLTTMIN-------PFVLIIHLGIIPSAYGWWLDVCTITMLGKSISDRVEFFSKFPLLSS 225
            FL  M +        F+L+I LG+ P   GWWLDVCTI M GK++  RV+FFS  PL SS
Sbjct: 526  FLAAMRHLMTMVKVAFLLVIELGVFPLMCGWWLDVCTIQMFGKTMVHRVQFFSASPLASS 585

Query: 224  SMHWMVGIIYMCQINISISQVQRVLRRGVLYFLHDLADPIEIILGVLIDEVQVSQ----L 57
             +HW+VGI+YM QI+I +S ++ VLR GVLYFL D ADP       LID+         L
Sbjct: 586  LVHWVVGIVYMLQISIFVSLLRGVLRNGVLYFLRDPADPNYNPFRDLIDDPVHKHARRVL 645

Query: 56   FSIAVNGILIVFLVYFP 6
             S+AV G LIV LV+ P
Sbjct: 646  LSVAVYGSLIVMLVFLP 662


>ref|XP_002282447.2| PREDICTED: E3 ubiquitin-protein ligase MARCH6 [Vitis vinifera]
          Length = 1195

 Score =  133 bits (334), Expect = 2e-29
 Identities = 84/197 (42%), Positives = 107/197 (54%), Gaps = 29/197 (14%)
 Frame = -1

Query: 509  SSCVYDVITLLTGYMVVLPLVCAAFDIP------------------IRTVASKIRHYLRK 384
            +S + DV TL  GYM V  L+     I                   I ++A  I    R+
Sbjct: 533  TSRLSDVTTLAIGYMFVFSLIFFYLGIVALIRYTKGEPLTMGRFYGISSIAETIPSLFRQ 592

Query: 383  FLTTMIN-------PFVLIIHLGIIPSAYGWWLDVCTITMLGKSISDRVEFFSKFPLLSS 225
            FL  M +        F+L+I LG+ P   GWWLDVCTI M GK++S RV+FFS  PL SS
Sbjct: 593  FLAAMRHLMTMIKVAFLLVIELGVFPLMCGWWLDVCTIRMFGKTLSQRVQFFSVSPLASS 652

Query: 224  SMHWMVGIIYMCQINISISQVQRVLRRGVLYFLHDLADPIEIILGVLIDEVQVSQ----L 57
             +HW+VGI+YM QI+I +S ++ VLR GVLYFL D ADP       LID+         L
Sbjct: 653  LVHWIVGIVYMLQISIFVSLLRGVLRNGVLYFLRDPADPNYNPFRDLIDDPAHKHARRVL 712

Query: 56   FSIAVNGILIVFLVYFP 6
             S+AV G LIV LV+ P
Sbjct: 713  LSVAVYGSLIVMLVFLP 729


>emb|CBI32382.3| unnamed protein product [Vitis vinifera]
          Length = 1110

 Score =  133 bits (334), Expect = 2e-29
 Identities = 84/197 (42%), Positives = 107/197 (54%), Gaps = 29/197 (14%)
 Frame = -1

Query: 509  SSCVYDVITLLTGYMVVLPLVCAAFDIP------------------IRTVASKIRHYLRK 384
            +S + DV TL  GYM V  L+     I                   I ++A  I    R+
Sbjct: 448  TSRLSDVTTLAIGYMFVFSLIFFYLGIVALIRYTKGEPLTMGRFYGISSIAETIPSLFRQ 507

Query: 383  FLTTMIN-------PFVLIIHLGIIPSAYGWWLDVCTITMLGKSISDRVEFFSKFPLLSS 225
            FL  M +        F+L+I LG+ P   GWWLDVCTI M GK++S RV+FFS  PL SS
Sbjct: 508  FLAAMRHLMTMIKVAFLLVIELGVFPLMCGWWLDVCTIRMFGKTLSQRVQFFSVSPLASS 567

Query: 224  SMHWMVGIIYMCQINISISQVQRVLRRGVLYFLHDLADPIEIILGVLIDEVQVSQ----L 57
             +HW+VGI+YM QI+I +S ++ VLR GVLYFL D ADP       LID+         L
Sbjct: 568  LVHWIVGIVYMLQISIFVSLLRGVLRNGVLYFLRDPADPNYNPFRDLIDDPAHKHARRVL 627

Query: 56   FSIAVNGILIVFLVYFP 6
             S+AV G LIV LV+ P
Sbjct: 628  LSVAVYGSLIVMLVFLP 644


>ref|XP_002298731.1| predicted protein [Populus trichocarpa] gi|222845989|gb|EEE83536.1|
           predicted protein [Populus trichocarpa]
          Length = 1054

 Score =  132 bits (333), Expect = 2e-29
 Identities = 83/182 (45%), Positives = 106/182 (58%), Gaps = 14/182 (7%)
 Frame = -1

Query: 509 SSCVYDVITLLTGYMVVLPLVCAAFDI-------PIRTVASKIRHYLR--KFLTTMIN-P 360
           +S + DV TL  GYM +  LV     I          T+ S  R +L   + L TMI   
Sbjct: 414 TSRLSDVTTLAIGYMFIFSLVFFYLGIIALIRYTRAETIPSLFRQFLAAMRHLMTMIKVA 473

Query: 359 FVLIIHLGIIPSAYGWWLDVCTITMLGKSISDRVEFFSKFPLLSSSMHWMVGIIYMCQIN 180
           F+L+I LG+ P   GWWLDVCTI M GKS++ RV+FF   PL SS +HW+VGI+YM  I+
Sbjct: 474 FLLVIELGVFPLMCGWWLDVCTIRMFGKSMAQRVQFFVISPLASSLVHWVVGIVYMLHIS 533

Query: 179 ISISQVQRVLRRGVLYFLHDLADPIEIILGVLIDEVQVSQ----LFSIAVNGILIVFLVY 12
           I +S ++ VLR+GVLYFL D ADP       LID+         L S+AV G LIV LV+
Sbjct: 534 IFVSLLRGVLRQGVLYFLRDPADPNYNPFRDLIDDPVHKHARRVLLSVAVYGSLIVMLVF 593

Query: 11  FP 6
            P
Sbjct: 594 LP 595


>ref|XP_002518729.1| ssm4 protein, putative [Ricinus communis] gi|223542110|gb|EEF43654.1|
            ssm4 protein, putative [Ricinus communis]
          Length = 806

 Score =  132 bits (332), Expect = 3e-29
 Identities = 84/197 (42%), Positives = 107/197 (54%), Gaps = 29/197 (14%)
 Frame = -1

Query: 509  SSCVYDVITLLTGYMVVLPLVCAAFDIP------------------IRTVASKIRHYLRK 384
            +S + DV TL  GYM +  LV     I                   I ++A  I    R+
Sbjct: 455  TSRLSDVTTLAIGYMFIFSLVFFYLGIVALIRYTKGEPMTMGRFYGIASIAETIPSLFRQ 514

Query: 383  FLTTMIN-------PFVLIIHLGIIPSAYGWWLDVCTITMLGKSISDRVEFFSKFPLLSS 225
            FL  M +        F+L+I LG+ P   GWWLDVCTI M GKS++ RV+FFS  PL SS
Sbjct: 515  FLAAMRHLMTMIKVAFLLVIELGVFPLMCGWWLDVCTIRMFGKSMAQRVQFFSVSPLASS 574

Query: 224  SMHWMVGIIYMCQINISISQVQRVLRRGVLYFLHDLADPIEIILGVLIDEVQVSQ----L 57
             +HW+VGI+YM QI+I +S ++ VLR GVLYFL D ADP       LID+         L
Sbjct: 575  LVHWVVGIVYMLQISIFVSLLRGVLRHGVLYFLRDPADPNYNPFRDLIDDPVHKHARRVL 634

Query: 56   FSIAVNGILIVFLVYFP 6
             S+AV G LIV LV+ P
Sbjct: 635  LSVAVYGSLIVMLVFLP 651


Top