BLASTX nr result

ID: Papaver23_contig00032862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00032862
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein lig...    59   1e-08
emb|CBI27748.3| unnamed protein product [Vitis vinifera]               59   1e-08
ref|XP_003548379.1| PREDICTED: probable E3 ubiquitin-protein lig...    58   9e-07
ref|XP_002303968.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|NP_190937.1| RING/U-box domain-containing protein [Arabidops...    56   3e-06

>ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B-like
           [Vitis vinifera]
          Length = 358

 Score = 58.9 bits (141), Expect(2) = 1e-08
 Identities = 24/42 (57%), Positives = 31/42 (73%)
 Frame = +3

Query: 231 STSKCSHIYCSECITKYIAAKLQDNISLITCPEFNCKEMLGP 356
           S   C H YCS+C+TKY+A+KLQDN+S I+CP  NC  +L P
Sbjct: 139 SIKGCPHSYCSDCMTKYVASKLQDNVSRISCPAPNCTGVLEP 180



 Score = 25.0 bits (53), Expect(2) = 1e-08
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 160 CEICMEAKPKNH 195
           CEIC++ KP NH
Sbjct: 125 CEICIDPKPLNH 136


>emb|CBI27748.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score = 58.9 bits (141), Expect(2) = 1e-08
 Identities = 24/42 (57%), Positives = 31/42 (73%)
 Frame = +3

Query: 231 STSKCSHIYCSECITKYIAAKLQDNISLITCPEFNCKEMLGP 356
           S   C H YCS+C+TKY+A+KLQDN+S I+CP  NC  +L P
Sbjct: 139 SIKGCPHSYCSDCMTKYVASKLQDNVSRISCPAPNCTGVLEP 180



 Score = 25.0 bits (53), Expect(2) = 1e-08
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 160 CEICMEAKPKNH 195
           CEIC++ KP NH
Sbjct: 125 CEICIDPKPLNH 136


>ref|XP_003548379.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-like
           [Glycine max]
          Length = 294

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 21/38 (55%), Positives = 30/38 (78%)
 Frame = +3

Query: 243 CSHIYCSECITKYIAAKLQDNISLITCPEFNCKEMLGP 356
           CSH +CS+CI KY+ AK+Q+NIS + CP+  CKE++ P
Sbjct: 110 CSHSFCSDCIGKYVTAKIQENISTVKCPDTKCKEVVEP 147


>ref|XP_002303968.1| predicted protein [Populus trichocarpa] gi|222841400|gb|EEE78947.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 21/50 (42%), Positives = 33/50 (66%)
 Frame = +3

Query: 213 QNHTRKSTSKCSHIYCSECITKYIAAKLQDNISLITCPEFNCKEMLGPMT 362
           QN     T  C H +C++CI++Y+AAK+QD   ++TCP  NC+ +L  +T
Sbjct: 112 QNDQMFKTESCVHSFCNDCISRYVAAKVQDGTRIVTCPGLNCRAVLDLVT 161


>ref|NP_190937.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|6729520|emb|CAB67676.1| putative protein [Arabidopsis
           thaliana] gi|21536688|gb|AAM61020.1| unknown
           [Arabidopsis thaliana] gi|332645607|gb|AEE79128.1|
           RING/U-box domain-containing protein [Arabidopsis
           thaliana]
          Length = 320

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 23/38 (60%), Positives = 27/38 (71%)
 Frame = +3

Query: 243 CSHIYCSECITKYIAAKLQDNISLITCPEFNCKEMLGP 356
           CSH YC++C++KYIAAKLQDNI  I CP   C   L P
Sbjct: 133 CSHFYCNDCVSKYIAAKLQDNILSIECPVSGCSGRLEP 170


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