BLASTX nr result

ID: Papaver23_contig00032833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00032833
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003620559.1| F-box protein [Medicago truncatula] gi|35549...    76   3e-12
ref|XP_003620556.1| F-box protein [Medicago truncatula] gi|35549...    76   3e-12
ref|XP_003598441.1| F-box/kelch-repeat protein [Medicago truncat...    68   9e-10
gb|AFK44336.1| unknown [Lotus japonicus]                               65   4e-09
ref|XP_002268486.1| PREDICTED: F-box/kelch-repeat protein At3g06...    65   4e-09

>ref|XP_003620559.1| F-box protein [Medicago truncatula] gi|355495574|gb|AES76777.1|
           F-box protein [Medicago truncatula]
          Length = 459

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
 Frame = +1

Query: 25  SNISMIPDKIYSLIISRLPVRSVLTCKCVCSSWLNLISTPDFVEMHLNFHRENSTSLM-- 198
           S +  +P+++ + I+S L V+++   KCV  SW +LIS P FV+MH     +N   ++  
Sbjct: 33  SLLMFMPNELIAEILSFLSVKTITQFKCVSKSWNSLISDPTFVKMHFKKSSQNPRLILPI 92

Query: 199 LGGKQEDKSDVIYSIGYHSLASSLLTQIEDNNKNNDVQDSNSSVEMEPL-----NLSGIV 363
           L    +D    + S   H +  +L   +  +  N+ ++D +  V   P+     NLS  V
Sbjct: 93  LEDPMKDDHCQVVSSPVHRILENLSITVAGDTYNS-LKDDHCQVVSLPVHRILDNLSIAV 151

Query: 364 RMDYPFKYLGLTVDLFGSCNGLVCLWFHDDYCDDSQQFFCLWNP 495
             D           + GSCNGL+CL F+      S  +FCLWNP
Sbjct: 152 AADTYHSLKDNHFQVVGSCNGLLCLLFNSLSATHSNYWFCLWNP 195


>ref|XP_003620556.1| F-box protein [Medicago truncatula] gi|355495571|gb|AES76774.1|
           F-box protein [Medicago truncatula]
          Length = 496

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 7/164 (4%)
 Frame = +1

Query: 25  SNISMIPDKIYSLIISRLPVRSVLTCKCVCSSWLNLISTPDFVEMHLNFHRENSTSLM-- 198
           S +  +P+++ + I+S L V+++   KCV  SW +LIS P FV+MH     +N   ++  
Sbjct: 33  SLLMFMPNELIAEILSFLSVKTITQFKCVSKSWNSLISDPTFVKMHFKKSSQNPRLILPI 92

Query: 199 LGGKQEDKSDVIYSIGYHSLASSLLTQIEDNNKNNDVQDSNSSVEMEPL-----NLSGIV 363
           L    +D    + S   H +  +L   +  +  N+ ++D +  V   P+     NLS  V
Sbjct: 93  LEDPMKDDHCQVVSSPVHRILENLSITVAGDTYNS-LKDDHCQVVSLPVHRILDNLSIAV 151

Query: 364 RMDYPFKYLGLTVDLFGSCNGLVCLWFHDDYCDDSQQFFCLWNP 495
             D           + GSCNGL+CL F+      S  +FCLWNP
Sbjct: 152 AADTYHSLKDNHFQVVGSCNGLLCLLFNSLSATHSNYWFCLWNP 195


>ref|XP_003598441.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487489|gb|AES68692.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 413

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 47/152 (30%), Positives = 69/152 (45%)
 Frame = +1

Query: 40  IPDKIYSLIISRLPVRSVLTCKCVCSSWLNLISTPDFVEMHLNFHRENSTSLMLGGKQED 219
           +P  +   I+ RLPV+ +L  +CVC SW +LIS P FV+  LN     +   +L      
Sbjct: 44  LPSDVIPEILCRLPVKFILQFRCVCKSWNSLISDPKFVKKQLNVSTARNIHFLL------ 97

Query: 220 KSDVIYSIGYHSLASSLLTQIEDNNKNNDVQDSNSSVEMEPLNLSGIVRMDYPFKYLGLT 399
             D    +G + L S  +  I  N     +  +++  E  P   +G    DYP   L   
Sbjct: 98  -YDHTRYLGKYILLSEPIDSIFTN-----ITSNSTRFEYSPNGFNG----DYPRSILH-- 145

Query: 400 VDLFGSCNGLVCLWFHDDYCDDSQQFFCLWNP 495
            D  GSCNG++C+       DD +    LWNP
Sbjct: 146 -DFVGSCNGILCI------ADDYKGLVILWNP 170


>gb|AFK44336.1| unknown [Lotus japonicus]
          Length = 193

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
 Frame = +1

Query: 10  EEMSMSNISMIPDKIYSLIISRLPVRSVLTCKCVCSSWLNLISTPDFVEMHLNFHRENST 189
           +  +M+  + +PD++   I+SRLPV+S+L  +CVC SW+ LIS P F++ HL+  ++++ 
Sbjct: 53  QNQAMAVATFLPDELVVEILSRLPVKSLLKFRCVCKSWMLLISDPYFIKKHLHLSKQSTL 112

Query: 190 SLMLGGKQEDKSDVIYSIGYHSLASSLLTQIEDNNKNNDVQD--SNSSVEMEPLNLSGIV 363
                              +H +  S  T  E + K+  V    +++S   E LN     
Sbjct: 113 -----------------FNHHRIILS-ATTAEFHLKSCSVSSLFNSTSTVCEDLN----- 149

Query: 364 RMDYPFKYLGLTVDLFGSCNGLVCLWFHDDYCDDSQQFFCLWNP 495
              YP K       + GSCNGL+C     D          LWNP
Sbjct: 150 ---YPVKNKYRHDGIVGSCNGLLCFAIKGD-------CVLLWNP 183


>ref|XP_002268486.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Vitis
           vinifera]
          Length = 360

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 44/155 (28%), Positives = 70/155 (45%)
 Frame = +1

Query: 31  ISMIPDKIYSLIISRLPVRSVLTCKCVCSSWLNLISTPDFVEMHLNFHRENSTSLMLGGK 210
           ++++PD+I   I+ RLPV+S+L  +CVC +W  LIS  +F EMH    +  + S +L   
Sbjct: 1   MAILPDEIIENILLRLPVKSLLRFRCVCKAWRALISDSEFAEMHYQQPQTQARSRVL--- 57

Query: 211 QEDKSDVIYSIGYHSLASSLLTQIEDNNKNNDVQDSNSSVEMEPLNLSGIVRMDYPFKYL 390
                         S    ++  ++ +   ND               SG+V +DYP +  
Sbjct: 58  -------------ISCPGRVIRSMDPDASGND--------------NSGVVNIDYPLEPS 90

Query: 391 GLTVDLFGSCNGLVCLWFHDDYCDDSQQFFCLWNP 495
            L   +  SC+GL+C+        DS     LWNP
Sbjct: 91  NLVFQILDSCDGLLCV-------IDSFHNPALWNP 118


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