BLASTX nr result

ID: Papaver23_contig00032608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00032608
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161296.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    87   2e-15
ref|XP_004136544.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin ca...    87   2e-15
ref|XP_002450997.1| hypothetical protein SORBIDRAFT_05g022390 [S...    86   4e-15
ref|XP_002884872.1| hypothetical protein ARALYDRAFT_317971 [Arab...    85   5e-15
ref|NP_187797.3| ubiquitin carboxyl-terminal hydrolase 13 [Arabi...    84   9e-15

>ref|XP_004161296.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Cucumis
           sativus]
          Length = 466

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 46/117 (39%), Positives = 68/117 (58%), Gaps = 5/117 (4%)
 Frame = -2

Query: 337 KFTWKINKFSKFTSMSTYSDVFSVNGFKWKACICPKGREEVYDHISLFLVPVDLTK---- 170
           KFTW+I  FS+      YSD FSV G+KW+  + PKG     DH+S++L   D       
Sbjct: 52  KFTWRIENFSRLNMKKYYSDSFSVGGYKWRILVFPKGNN--VDHLSMYLDVADSGTLPYG 109

Query: 169 -SVDTQFSFAITSQKDRNNTLRFELKHSFHEGTIQGFGWTFFMPLADLHDRTKGYIV 2
            S   QFS A+ +Q  +  ++R + KH F+      +G+T FMPL+DL+D ++GY+V
Sbjct: 110 WSRYAQFSLAVVNQVHKKYSIRKDTKHQFN-ARESDWGFTSFMPLSDLYDPSRGYLV 165


>ref|XP_004136544.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 12-like [Cucumis sativus]
          Length = 1110

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 46/117 (39%), Positives = 68/117 (58%), Gaps = 5/117 (4%)
 Frame = -2

Query: 337 KFTWKINKFSKFTSMSTYSDVFSVNGFKWKACICPKGREEVYDHISLFLVPVDLTK---- 170
           KFTW+I  FS+      YSD FSV G+KW+  + PKG     DH+S++L   D       
Sbjct: 52  KFTWRIENFSRLNMKKYYSDSFSVGGYKWRILVFPKGNN--VDHLSMYLDVADSGTLPYG 109

Query: 169 -SVDTQFSFAITSQKDRNNTLRFELKHSFHEGTIQGFGWTFFMPLADLHDRTKGYIV 2
            S   QFS A+ +Q  +  ++R + KH F+      +G+T FMPL+DL+D ++GY+V
Sbjct: 110 WSRYAQFSLAVVNQVHKKYSIRKDTKHQFN-ARESDWGFTSFMPLSDLYDPSRGYLV 165


>ref|XP_002450997.1| hypothetical protein SORBIDRAFT_05g022390 [Sorghum bicolor]
           gi|241936840|gb|EES09985.1| hypothetical protein
           SORBIDRAFT_05g022390 [Sorghum bicolor]
          Length = 1118

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 5/117 (4%)
 Frame = -2

Query: 337 KFTWKINKFSKFTSMSTYSDVFSVNGFKWKACICPKGREEVYDHISLFLVPVDLTK---- 170
           +FTW I  F++F     YS+VF V GFKW+  I PKG     DH S++L   D       
Sbjct: 58  RFTWTIENFTRFNGKKHYSEVFVVGGFKWRVLIFPKGNN--VDHFSMYLDVADSANLPYG 115

Query: 169 -SVDTQFSFAITSQKDRNNTLRFELKHSFHEGTIQGFGWTFFMPLADLHDRTKGYIV 2
            S   QFS A+ +Q     T+R + +H F+      +G+T FMPL+DL+D ++GY+V
Sbjct: 116 WSRYAQFSLAVVNQIQPKYTIRKDTQHQFN-ARESDWGFTSFMPLSDLYDASRGYLV 171


>ref|XP_002884872.1| hypothetical protein ARALYDRAFT_317971 [Arabidopsis lyrata subsp.
           lyrata] gi|297330712|gb|EFH61131.1| hypothetical protein
           ARALYDRAFT_317971 [Arabidopsis lyrata subsp. lyrata]
          Length = 1115

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 46/117 (39%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
 Frame = -2

Query: 337 KFTWKINKFSKFTSMSTYSDVFSVNGFKWKACICPKGREEVYDHISLFLVPVDLTK---- 170
           KFTW I  F++  +   YSDVF V G+KW+  I PKG     DH+S++L   D       
Sbjct: 55  KFTWTIPIFTRLNTRKHYSDVFVVGGYKWRILIFPKGNN--VDHLSMYLDVADAANLPYG 112

Query: 169 -SVDTQFSFAITSQKDRNNTLRFELKHSFHEGTIQGFGWTFFMPLADLHDRTKGYIV 2
            S  +QFS A+ +Q +   ++R E +H F+      +G+T FMPL++L+D T+GY+V
Sbjct: 113 WSRYSQFSLAVVNQVNNRYSIRKETQHQFN-ARESDWGFTSFMPLSELYDPTRGYLV 168


>ref|NP_187797.3| ubiquitin carboxyl-terminal hydrolase 13 [Arabidopsis thaliana]
           gi|75243459|sp|Q84WU2.1|UBP13_ARATH RecName:
           Full=Ubiquitin carboxyl-terminal hydrolase 13; AltName:
           Full=Deubiquitinating enzyme 13; Short=AtUBP13; AltName:
           Full=Ubiquitin thioesterase 13; AltName:
           Full=Ubiquitin-specific-processing protease 13
           gi|27754270|gb|AAO22588.1| putative ubiquitin
           carboxyl-terminal hydrolase [Arabidopsis thaliana]
           gi|332641595|gb|AEE75116.1| ubiquitin carboxyl-terminal
           hydrolase 13 [Arabidopsis thaliana]
          Length = 1115

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 45/117 (38%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
 Frame = -2

Query: 337 KFTWKINKFSKFTSMSTYSDVFSVNGFKWKACICPKGREEVYDHISLFLVPVDLTK---- 170
           KFTW I  F++  +   YSDVF V G+KW+  I PKG     DH+S++L   D       
Sbjct: 55  KFTWTIPMFTRLNTRKHYSDVFVVGGYKWRILIFPKGNN--VDHLSMYLDVADAANLPYG 112

Query: 169 -SVDTQFSFAITSQKDRNNTLRFELKHSFHEGTIQGFGWTFFMPLADLHDRTKGYIV 2
            S  +QFS A+ +Q +   ++R E +H F+      +G+T FMPL++L++ T+GY+V
Sbjct: 113 WSRYSQFSLAVVNQVNNRYSIRKETQHQFN-ARESDWGFTSFMPLSELYEPTRGYLV 168


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