BLASTX nr result

ID: Papaver23_contig00032602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00032602
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...   186   2e-45
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   183   2e-44
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]             182   3e-44
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   181   6e-44
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...   181   6e-44

>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score =  186 bits (472), Expect = 2e-45
 Identities = 94/191 (49%), Positives = 127/191 (66%), Gaps = 1/191 (0%)
 Frame = +2

Query: 2    LIPKVKHPSLPSEFRPIALTNIMYQVITKILSQRLKKHLNSLVDHAQSAFIPGRMIIDNI 181
            LIPKVK P L  + RPI+L N+ Y++++K+L+ RLKK L  ++  AQSAF+PGR+I DNI
Sbjct: 720  LIPKVKKPELIKDLRPISLCNVCYKLVSKVLANRLKKILPDVISPAQSAFVPGRLISDNI 779

Query: 182  IAAKEIFHTMSTS-SSILGAYALKIDISKAYDKVSWRFLSHCLRAYGIIGKTHELIMKCV 358
            + A E+ H M    S  +G  A K+D+SKAYD+V W FL   +   G       LIMKCV
Sbjct: 780  LIADEMTHYMRNKRSGQVGYAAFKLDMSKAYDRVEWSFLHDMMLKLGFHTDWVNLIMKCV 839

Query: 359  STASFSLVINGQAEGFFTSERGLRQGCPLSPYLFILCTQGLSWLMRTMENNALYNGYKIC 538
            ST ++ + +NG+    F+ ERGLRQG PLSPYLF+LC +G S L+   E     +G +IC
Sbjct: 840  STVTYRIRVNGELSESFSPERGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRIC 899

Query: 539  RNAPSVSHLMF 571
            + APSVSHL+F
Sbjct: 900  QGAPSVSHLLF 910


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  183 bits (465), Expect = 2e-44
 Identities = 93/191 (48%), Positives = 126/191 (65%), Gaps = 1/191 (0%)
 Frame = +2

Query: 2    LIPKVKHPSLPSEFRPIALTNIMYQVITKILSQRLKKHLNSLVDHAQSAFIPGRMIIDNI 181
            LIPKVK P L  + RPI+L N+ Y++++K+L+ RLKK L  ++  AQSAF+PGR+I DNI
Sbjct: 747  LIPKVKKPELIKDLRPISLCNVCYKLVSKVLANRLKKILPDVISPAQSAFVPGRLISDNI 806

Query: 182  IAAKEIFHTMSTS-SSILGAYALKIDISKAYDKVSWRFLSHCLRAYGIIGKTHELIMKCV 358
            + A E+ H M    S  +G  A K+D+SKAYD+V W FL   +   G       LIMKCV
Sbjct: 807  LIADEMTHYMRNKRSGQVGYAAFKLDMSKAYDRVEWSFLHDMILKLGFHTDWVNLIMKCV 866

Query: 359  STASFSLVINGQAEGFFTSERGLRQGCPLSPYLFILCTQGLSWLMRTMENNALYNGYKIC 538
            ST ++ + +NG+    F+  RGLRQG PLSPYLF+LC +G S L+   E     +G +IC
Sbjct: 867  STVTYRIRVNGELSESFSPGRGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRIC 926

Query: 539  RNAPSVSHLMF 571
            + APSVSHL+F
Sbjct: 927  QGAPSVSHLLF 937


>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score =  182 bits (462), Expect = 3e-44
 Identities = 92/191 (48%), Positives = 126/191 (65%), Gaps = 1/191 (0%)
 Frame = +2

Query: 2   LIPKVKHPSLPSEFRPIALTNIMYQVITKILSQRLKKHLNSLVDHAQSAFIPGRMIIDNI 181
           LIPK + P+  +E RPI+L N+ Y++I+KIL QRLKK L SL+    SAF+ GR+I DNI
Sbjct: 341 LIPKTERPTRMTELRPISLCNVGYKIISKILCQRLKKILPSLISETHSAFVEGRLISDNI 400

Query: 182 IAAKEIFHTMSTSSSILGAY-ALKIDISKAYDKVSWRFLSHCLRAYGIIGKTHELIMKCV 358
           + A+E+FH + T+ S  G + A+K D+SKAYD+V W F+   L+  G   K    IM C+
Sbjct: 401 LIAQEMFHGLRTNPSCKGKFMAIKTDMSKAYDRVEWNFIEELLKKMGFCEKWISWIMWCI 460

Query: 359 STASFSLVINGQAEGFFTSERGLRQGCPLSPYLFILCTQGLSWLMRTMENNALYNGYKIC 538
           +T  + +++NGQ  G    +RGLRQG PLSPYLFILCT+ L   +R  E   L  G K+ 
Sbjct: 461 TTVQYRVLLNGQPRGLIVPKRGLRQGDPLSPYLFILCTEVLIANIRKAEQEKLITGIKVA 520

Query: 539 RNAPSVSHLMF 571
             +PSVSHL+F
Sbjct: 521 TASPSVSHLLF 531


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  181 bits (460), Expect = 6e-44
 Identities = 94/191 (49%), Positives = 127/191 (66%), Gaps = 1/191 (0%)
 Frame = +2

Query: 2   LIPKVKHPSLPSEFRPIALTNIMYQVITKILSQRLKKHLNSLVDHAQSAFIPGRMIIDNI 181
           LIPK + P+  +E RPI+L N+ Y+VI+KIL QRLK  L +L+   QSAF+ GR+I DNI
Sbjct: 275 LIPKTERPTRMTELRPISLCNVGYKVISKILCQRLKTVLPNLISETQSAFVDGRLISDNI 334

Query: 182 IAAKEIFHTMSTSSSILGAY-ALKIDISKAYDKVSWRFLSHCLRAYGIIGKTHELIMKCV 358
           + A+E+FH + T+SS    + A+K D+SKAYD+V W F+   LR  G   K    IM C+
Sbjct: 335 LIAQEMFHGLRTNSSCKDKFMAIKTDMSKAYDQVEWNFIEALLRKMGFCEKWISWIMWCI 394

Query: 359 STASFSLVINGQAEGFFTSERGLRQGCPLSPYLFILCTQGLSWLMRTMENNALYNGYKIC 538
           +T  + ++INGQ +G    ERGLRQG PLSPYLFILCT+ L   +R  E   L  G K+ 
Sbjct: 395 TTVQYKVLINGQPKGLIIPERGLRQGDPLSPYLFILCTEVLIANIRKAERQNLITGIKVA 454

Query: 539 RNAPSVSHLMF 571
             +P+VSHL+F
Sbjct: 455 TPSPAVSHLLF 465


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score =  181 bits (460), Expect = 6e-44
 Identities = 88/191 (46%), Positives = 127/191 (66%), Gaps = 1/191 (0%)
 Frame = +2

Query: 2   LIPKVKHPSLPSEFRPIALTNIMYQVITKILSQRLKKHLNSLVDHAQSAFIPGRMIIDNI 181
           LIPK   P +  + RPI+L N++Y++I+K+L+ RLKK L +++ ++QSAF+PGR+I DN+
Sbjct: 72  LIPKTNTPQMLKDLRPISLCNVLYKLISKVLANRLKKILPNIISNSQSAFVPGRLITDNV 131

Query: 182 IAAKEIFHTM-STSSSILGAYALKIDISKAYDKVSWRFLSHCLRAYGIIGKTHELIMKCV 358
           + A EI H + S      G  A+K+D+SKAYD+V W FL + +R  G   K  +LIMKCV
Sbjct: 132 LLAYEIVHHLKSIKKGAGGLAAIKLDMSKAYDRVEWSFLENMMRKMGFDEKWVQLIMKCV 191

Query: 359 STASFSLVINGQAEGFFTSERGLRQGCPLSPYLFILCTQGLSWLMRTMENNALYNGYKIC 538
           +T ++ + +N         +RGLRQG PLSPYLFI+C +GLS +++  E      G KIC
Sbjct: 192 TTVTYKIKVNDSYTQKIFPQRGLRQGDPLSPYLFIICAEGLSAMLQKAEQKGKIEGIKIC 251

Query: 539 RNAPSVSHLMF 571
           R AP V+HL F
Sbjct: 252 RGAPKVNHLFF 262


Top