BLASTX nr result

ID: Papaver23_contig00032535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00032535
         (1279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522807.1| DNA repair protein RAD50, putative [Ricinus ...   248   2e-63
ref|XP_004171095.1| PREDICTED: DNA repair protein RAD50-like, pa...   248   2e-63
ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair p...   248   2e-63
emb|CAN72711.1| hypothetical protein VITISV_018097 [Vitis vinifera]   248   2e-63
ref|XP_003552170.1| PREDICTED: DNA repair protein RAD50-like [Gl...   247   5e-63

>ref|XP_002522807.1| DNA repair protein RAD50, putative [Ricinus communis]
            gi|223538045|gb|EEF39658.1| DNA repair protein RAD50,
            putative [Ricinus communis]
          Length = 1256

 Score =  248 bits (634), Expect = 2e-63
 Identities = 122/124 (98%), Positives = 122/124 (98%)
 Frame = -3

Query: 1277 GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVKGETETKGQIKLRFKTAVGKDV 1098
            GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKV GETETKGQIKLRFKTA GKDV
Sbjct: 34   GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVAGETETKGQIKLRFKTAAGKDV 93

Query: 1097 VCIRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILE 918
            VCIRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILE
Sbjct: 94   VCIRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILE 153

Query: 917  NVIF 906
            NVIF
Sbjct: 154  NVIF 157



 Score =  209 bits (531), Expect = 2e-51
 Identities = 111/225 (49%), Positives = 152/225 (67%)
 Frame = -1

Query: 676  PSIPFSDEVAVSLTNRVQTRIADLEKDIQDKKMSNDSELQVLWESYVAANMRYSSLEAQK 497
            P  P SD++A++LTNR+++R+ DL KD+QDKK SND+E++   + Y+  N R+  ++AQK
Sbjct: 385  PQAPLSDDIALNLTNRLKSRLTDLRKDLQDKKTSNDTEVKTAEDCYLDVNDRWKHIDAQK 444

Query: 496  QAKVTVKEGVXXXXXXXXXXXXXXEGQLSKYNLSRIDEKEKQMQTEVVKKTHQLEERNFE 317
            QAK  +K G+              E ++S  NLS IDE+EK M+ EV +KT+QL ER FE
Sbjct: 445  QAKREIKNGILDRITKKEHDRASFEEEISHVNLSHIDEREKNMRIEVERKTNQLAERAFE 504

Query: 316  SNINQIGAELYAIGQKIEVLNRERDVLASDSDDRIKLGLKRTELEIRQXXXXXXXXXXXX 137
            SNI Q   ELY I Q+I+ L+ E+D+LA  S+DR+KL LK+ +LE  +            
Sbjct: 505  SNIRQKQTELYGIEQEIKALDGEKDILAIYSEDRVKLSLKKADLENHKKKHKKIIDEHKD 564

Query: 136  XIRGMLKGRLPSDKDLKKEITQAVGTLKKEYDDLNSKAIEAEKEV 2
             IRG+LKGR+PSDKD+KKEITQA+  L  E+DDLNSK+ EAEKEV
Sbjct: 565  RIRGVLKGRVPSDKDMKKEITQALRALAVEFDDLNSKSHEAEKEV 609


>ref|XP_004171095.1| PREDICTED: DNA repair protein RAD50-like, partial [Cucumis sativus]
          Length = 299

 Score =  248 bits (633), Expect = 2e-63
 Identities = 121/124 (97%), Positives = 122/124 (98%)
 Frame = -3

Query: 1277 GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVKGETETKGQIKLRFKTAVGKDV 1098
            GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKV GETETKGQIKLRFKTA GKDV
Sbjct: 34   GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVAGETETKGQIKLRFKTAAGKDV 93

Query: 1097 VCIRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILE 918
            VCIRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKA+LE
Sbjct: 94   VCIRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAVLE 153

Query: 917  NVIF 906
            NVIF
Sbjct: 154  NVIF 157


>ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50-like [Vitis
            vinifera]
          Length = 1316

 Score =  248 bits (633), Expect = 2e-63
 Identities = 121/124 (97%), Positives = 122/124 (98%)
 Frame = -3

Query: 1277 GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVKGETETKGQIKLRFKTAVGKDV 1098
            GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKV GETETKGQIKLRFKTA GKDV
Sbjct: 34   GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVAGETETKGQIKLRFKTAAGKDV 93

Query: 1097 VCIRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILE 918
            VCIRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKA+LE
Sbjct: 94   VCIRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAVLE 153

Query: 917  NVIF 906
            NVIF
Sbjct: 154  NVIF 157



 Score =  235 bits (600), Expect = 2e-59
 Identities = 141/331 (42%), Positives = 195/331 (58%), Gaps = 20/331 (6%)
 Frame = -1

Query: 934  QKLFWKMLYLKSDTGEELQEWEAKFKEGLHFYNLKLASWIWK*LIPRQDMDTQVN----- 770
            QK +  +     DT EEL EW+ KF+E +     K++       + R+  DT+       
Sbjct: 288  QKQYAALAEENEDTDEELNEWKTKFEERIALLESKISK------LEREMDDTETKGSFLK 341

Query: 769  -------WQAST*S**TAEIEI*A*YFHSKPFPKAYFF--------PSIPFSDEVAVSLT 635
                   W+ S       E E+ +   + +       F        PS+PFS+E+A++ T
Sbjct: 342  QTINDYIWEISKLQ---TEAEVHSSLKNERDSTIQKLFARNNLGSLPSVPFSNEIALNFT 398

Query: 634  NRVQTRIADLEKDIQDKKMSNDSELQVLWESYVAANMRYSSLEAQKQAKVTVKEGVXXXX 455
            NR++TR+ DLEKD+QDKK S + EL+V W+ Y+ AN  +  +EAQKQAKV +K G+    
Sbjct: 399  NRIKTRLMDLEKDLQDKKKSIEMELKVAWDRYMDANDHWKDIEAQKQAKVEIKSGILKRI 458

Query: 454  XXXXXXXXXXEGQLSKYNLSRIDEKEKQMQTEVVKKTHQLEERNFESNINQIGAELYAIG 275
                      E Q+S  +LS IDE+EK ++ EV +KT+QL ER FESNI Q  +ELY+I 
Sbjct: 459  EEKENERDSFELQISNVSLSHIDEREKNLRIEVERKTNQLAEREFESNIRQKQSELYSIE 518

Query: 274  QKIEVLNRERDVLASDSDDRIKLGLKRTELEIRQXXXXXXXXXXXXXIRGMLKGRLPSDK 95
            QKI+ LNRE+D++A DS+DR+KL LK+ ELE  +             IRG+LKGRLP DK
Sbjct: 519  QKIKALNREKDIMAVDSEDRVKLSLKKGELENHKKKHQKIMDEYKDRIRGVLKGRLPPDK 578

Query: 94   DLKKEITQAVGTLKKEYDDLNSKAIEAEKEV 2
            DLKKEITQA+  L  E+DD+NSK+ EAEKEV
Sbjct: 579  DLKKEITQALRALGIEFDDMNSKSREAEKEV 609


>emb|CAN72711.1| hypothetical protein VITISV_018097 [Vitis vinifera]
          Length = 244

 Score =  248 bits (633), Expect = 2e-63
 Identities = 121/124 (97%), Positives = 122/124 (98%)
 Frame = -3

Query: 1277 GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVKGETETKGQIKLRFKTAVGKDV 1098
            GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKV GETETKGQIKLRFKTA GKDV
Sbjct: 34   GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVAGETETKGQIKLRFKTAAGKDV 93

Query: 1097 VCIRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILE 918
            VCIRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKA+LE
Sbjct: 94   VCIRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAVLE 153

Query: 917  NVIF 906
            NVIF
Sbjct: 154  NVIF 157


>ref|XP_003552170.1| PREDICTED: DNA repair protein RAD50-like [Glycine max]
          Length = 1316

 Score =  247 bits (630), Expect = 5e-63
 Identities = 120/124 (96%), Positives = 122/124 (98%)
 Frame = -3

Query: 1277 GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVKGETETKGQIKLRFKTAVGKDV 1098
            GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKV GETETKGQIKLRFKTA GKDV
Sbjct: 34   GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVAGETETKGQIKLRFKTAAGKDV 93

Query: 1097 VCIRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILE 918
            VC+RSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMD+EIPALMGVSKAILE
Sbjct: 94   VCVRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDKEIPALMGVSKAILE 153

Query: 917  NVIF 906
            NVIF
Sbjct: 154  NVIF 157



 Score =  187 bits (476), Expect = 4e-45
 Identities = 120/331 (36%), Positives = 184/331 (55%), Gaps = 20/331 (6%)
 Frame = -1

Query: 934  QKLFWKMLYLKSDTGEELQEWEAKFKEGLHFYNLKLASWIWK*LIPRQDMDTQ-VNWQAS 758
            QK +  +     DT EEL EW+ KF+E +     K++         R + +T+ ++  +S
Sbjct: 288  QKQYLALTEEIEDTDEELMEWKTKFEERIASLETKIS---------RLERETEDIDCTSS 338

Query: 757  T*S**TAE-IEI*A*YFHSKPFPKAY------------------FFPSIPFSDEVAVSLT 635
            T     AE IE+ A          ++                    P  PFS EVA++LT
Sbjct: 339  TLKETIAESIEVIAKLQAEAEAHMSFKNERDSSIHNLFTTYNLGSLPKSPFSAEVALNLT 398

Query: 634  NRVQTRIADLEKDIQDKKMSNDSELQVLWESYVAANMRYSSLEAQKQAKVTVKEGVXXXX 455
            NRV++R+ DLEKD+ DKK +ND+E+++ ++ Y+ AN R    EA+ +A    K G+    
Sbjct: 399  NRVKSRLEDLEKDLDDKKKANDNEIKMAFDCYMNANDRLKHTEAKIKAMTGSKSGISKRI 458

Query: 454  XXXXXXXXXXEGQLSKYNLSRIDEKEKQMQTEVVKKTHQLEERNFESNINQIGAELYAIG 275
                      E Q+S  N S++DE+E+ ++ EV +K  QL+ER FE N  ++  E+Y++ 
Sbjct: 459  EEKKNELDSLELQISDENFSQLDERERNLENEVKRKASQLDERQFEPNKCEVEKEIYSVD 518

Query: 274  QKIEVLNRERDVLASDSDDRIKLGLKRTELEIRQXXXXXXXXXXXXXIRGMLKGRLPSDK 95
            QKI+ ++RE+D++ SDS DR+KL  K+ ELE ++             IR +LKGR+P DK
Sbjct: 519  QKIKAVSREKDIMVSDSQDRVKLSYKKGELESQKKKHKKIIDEQKDKIRKVLKGRVPLDK 578

Query: 94   DLKKEITQAVGTLKKEYDDLNSKAIEAEKEV 2
            D+KKEI QA+  +  E+DDLN+K  EAEKEV
Sbjct: 579  DVKKEIMQALRAVGAEFDDLNAKYREAEKEV 609


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