BLASTX nr result
ID: Papaver23_contig00032535
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00032535
(1279 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002522807.1| DNA repair protein RAD50, putative [Ricinus ... 248 2e-63
ref|XP_004171095.1| PREDICTED: DNA repair protein RAD50-like, pa... 248 2e-63
ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair p... 248 2e-63
emb|CAN72711.1| hypothetical protein VITISV_018097 [Vitis vinifera] 248 2e-63
ref|XP_003552170.1| PREDICTED: DNA repair protein RAD50-like [Gl... 247 5e-63
>ref|XP_002522807.1| DNA repair protein RAD50, putative [Ricinus communis]
gi|223538045|gb|EEF39658.1| DNA repair protein RAD50,
putative [Ricinus communis]
Length = 1256
Score = 248 bits (634), Expect = 2e-63
Identities = 122/124 (98%), Positives = 122/124 (98%)
Frame = -3
Query: 1277 GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVKGETETKGQIKLRFKTAVGKDV 1098
GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKV GETETKGQIKLRFKTA GKDV
Sbjct: 34 GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVAGETETKGQIKLRFKTAAGKDV 93
Query: 1097 VCIRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILE 918
VCIRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILE
Sbjct: 94 VCIRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILE 153
Query: 917 NVIF 906
NVIF
Sbjct: 154 NVIF 157
Score = 209 bits (531), Expect = 2e-51
Identities = 111/225 (49%), Positives = 152/225 (67%)
Frame = -1
Query: 676 PSIPFSDEVAVSLTNRVQTRIADLEKDIQDKKMSNDSELQVLWESYVAANMRYSSLEAQK 497
P P SD++A++LTNR+++R+ DL KD+QDKK SND+E++ + Y+ N R+ ++AQK
Sbjct: 385 PQAPLSDDIALNLTNRLKSRLTDLRKDLQDKKTSNDTEVKTAEDCYLDVNDRWKHIDAQK 444
Query: 496 QAKVTVKEGVXXXXXXXXXXXXXXEGQLSKYNLSRIDEKEKQMQTEVVKKTHQLEERNFE 317
QAK +K G+ E ++S NLS IDE+EK M+ EV +KT+QL ER FE
Sbjct: 445 QAKREIKNGILDRITKKEHDRASFEEEISHVNLSHIDEREKNMRIEVERKTNQLAERAFE 504
Query: 316 SNINQIGAELYAIGQKIEVLNRERDVLASDSDDRIKLGLKRTELEIRQXXXXXXXXXXXX 137
SNI Q ELY I Q+I+ L+ E+D+LA S+DR+KL LK+ +LE +
Sbjct: 505 SNIRQKQTELYGIEQEIKALDGEKDILAIYSEDRVKLSLKKADLENHKKKHKKIIDEHKD 564
Query: 136 XIRGMLKGRLPSDKDLKKEITQAVGTLKKEYDDLNSKAIEAEKEV 2
IRG+LKGR+PSDKD+KKEITQA+ L E+DDLNSK+ EAEKEV
Sbjct: 565 RIRGVLKGRVPSDKDMKKEITQALRALAVEFDDLNSKSHEAEKEV 609
>ref|XP_004171095.1| PREDICTED: DNA repair protein RAD50-like, partial [Cucumis sativus]
Length = 299
Score = 248 bits (633), Expect = 2e-63
Identities = 121/124 (97%), Positives = 122/124 (98%)
Frame = -3
Query: 1277 GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVKGETETKGQIKLRFKTAVGKDV 1098
GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKV GETETKGQIKLRFKTA GKDV
Sbjct: 34 GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVAGETETKGQIKLRFKTAAGKDV 93
Query: 1097 VCIRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILE 918
VCIRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKA+LE
Sbjct: 94 VCIRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAVLE 153
Query: 917 NVIF 906
NVIF
Sbjct: 154 NVIF 157
>ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50-like [Vitis
vinifera]
Length = 1316
Score = 248 bits (633), Expect = 2e-63
Identities = 121/124 (97%), Positives = 122/124 (98%)
Frame = -3
Query: 1277 GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVKGETETKGQIKLRFKTAVGKDV 1098
GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKV GETETKGQIKLRFKTA GKDV
Sbjct: 34 GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVAGETETKGQIKLRFKTAAGKDV 93
Query: 1097 VCIRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILE 918
VCIRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKA+LE
Sbjct: 94 VCIRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAVLE 153
Query: 917 NVIF 906
NVIF
Sbjct: 154 NVIF 157
Score = 235 bits (600), Expect = 2e-59
Identities = 141/331 (42%), Positives = 195/331 (58%), Gaps = 20/331 (6%)
Frame = -1
Query: 934 QKLFWKMLYLKSDTGEELQEWEAKFKEGLHFYNLKLASWIWK*LIPRQDMDTQVN----- 770
QK + + DT EEL EW+ KF+E + K++ + R+ DT+
Sbjct: 288 QKQYAALAEENEDTDEELNEWKTKFEERIALLESKISK------LEREMDDTETKGSFLK 341
Query: 769 -------WQAST*S**TAEIEI*A*YFHSKPFPKAYFF--------PSIPFSDEVAVSLT 635
W+ S E E+ + + + F PS+PFS+E+A++ T
Sbjct: 342 QTINDYIWEISKLQ---TEAEVHSSLKNERDSTIQKLFARNNLGSLPSVPFSNEIALNFT 398
Query: 634 NRVQTRIADLEKDIQDKKMSNDSELQVLWESYVAANMRYSSLEAQKQAKVTVKEGVXXXX 455
NR++TR+ DLEKD+QDKK S + EL+V W+ Y+ AN + +EAQKQAKV +K G+
Sbjct: 399 NRIKTRLMDLEKDLQDKKKSIEMELKVAWDRYMDANDHWKDIEAQKQAKVEIKSGILKRI 458
Query: 454 XXXXXXXXXXEGQLSKYNLSRIDEKEKQMQTEVVKKTHQLEERNFESNINQIGAELYAIG 275
E Q+S +LS IDE+EK ++ EV +KT+QL ER FESNI Q +ELY+I
Sbjct: 459 EEKENERDSFELQISNVSLSHIDEREKNLRIEVERKTNQLAEREFESNIRQKQSELYSIE 518
Query: 274 QKIEVLNRERDVLASDSDDRIKLGLKRTELEIRQXXXXXXXXXXXXXIRGMLKGRLPSDK 95
QKI+ LNRE+D++A DS+DR+KL LK+ ELE + IRG+LKGRLP DK
Sbjct: 519 QKIKALNREKDIMAVDSEDRVKLSLKKGELENHKKKHQKIMDEYKDRIRGVLKGRLPPDK 578
Query: 94 DLKKEITQAVGTLKKEYDDLNSKAIEAEKEV 2
DLKKEITQA+ L E+DD+NSK+ EAEKEV
Sbjct: 579 DLKKEITQALRALGIEFDDMNSKSREAEKEV 609
>emb|CAN72711.1| hypothetical protein VITISV_018097 [Vitis vinifera]
Length = 244
Score = 248 bits (633), Expect = 2e-63
Identities = 121/124 (97%), Positives = 122/124 (98%)
Frame = -3
Query: 1277 GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVKGETETKGQIKLRFKTAVGKDV 1098
GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKV GETETKGQIKLRFKTA GKDV
Sbjct: 34 GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVAGETETKGQIKLRFKTAAGKDV 93
Query: 1097 VCIRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILE 918
VCIRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKA+LE
Sbjct: 94 VCIRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAVLE 153
Query: 917 NVIF 906
NVIF
Sbjct: 154 NVIF 157
>ref|XP_003552170.1| PREDICTED: DNA repair protein RAD50-like [Glycine max]
Length = 1316
Score = 247 bits (630), Expect = 5e-63
Identities = 120/124 (96%), Positives = 122/124 (98%)
Frame = -3
Query: 1277 GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVKGETETKGQIKLRFKTAVGKDV 1098
GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKV GETETKGQIKLRFKTA GKDV
Sbjct: 34 GPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVAGETETKGQIKLRFKTAAGKDV 93
Query: 1097 VCIRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILE 918
VC+RSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMD+EIPALMGVSKAILE
Sbjct: 94 VCVRSFQLTQKASKMEYKAIESVLQTINPHTGEKVCLSYRCADMDKEIPALMGVSKAILE 153
Query: 917 NVIF 906
NVIF
Sbjct: 154 NVIF 157
Score = 187 bits (476), Expect = 4e-45
Identities = 120/331 (36%), Positives = 184/331 (55%), Gaps = 20/331 (6%)
Frame = -1
Query: 934 QKLFWKMLYLKSDTGEELQEWEAKFKEGLHFYNLKLASWIWK*LIPRQDMDTQ-VNWQAS 758
QK + + DT EEL EW+ KF+E + K++ R + +T+ ++ +S
Sbjct: 288 QKQYLALTEEIEDTDEELMEWKTKFEERIASLETKIS---------RLERETEDIDCTSS 338
Query: 757 T*S**TAE-IEI*A*YFHSKPFPKAY------------------FFPSIPFSDEVAVSLT 635
T AE IE+ A ++ P PFS EVA++LT
Sbjct: 339 TLKETIAESIEVIAKLQAEAEAHMSFKNERDSSIHNLFTTYNLGSLPKSPFSAEVALNLT 398
Query: 634 NRVQTRIADLEKDIQDKKMSNDSELQVLWESYVAANMRYSSLEAQKQAKVTVKEGVXXXX 455
NRV++R+ DLEKD+ DKK +ND+E+++ ++ Y+ AN R EA+ +A K G+
Sbjct: 399 NRVKSRLEDLEKDLDDKKKANDNEIKMAFDCYMNANDRLKHTEAKIKAMTGSKSGISKRI 458
Query: 454 XXXXXXXXXXEGQLSKYNLSRIDEKEKQMQTEVVKKTHQLEERNFESNINQIGAELYAIG 275
E Q+S N S++DE+E+ ++ EV +K QL+ER FE N ++ E+Y++
Sbjct: 459 EEKKNELDSLELQISDENFSQLDERERNLENEVKRKASQLDERQFEPNKCEVEKEIYSVD 518
Query: 274 QKIEVLNRERDVLASDSDDRIKLGLKRTELEIRQXXXXXXXXXXXXXIRGMLKGRLPSDK 95
QKI+ ++RE+D++ SDS DR+KL K+ ELE ++ IR +LKGR+P DK
Sbjct: 519 QKIKAVSREKDIMVSDSQDRVKLSYKKGELESQKKKHKKIIDEQKDKIRKVLKGRVPLDK 578
Query: 94 DLKKEITQAVGTLKKEYDDLNSKAIEAEKEV 2
D+KKEI QA+ + E+DDLN+K EAEKEV
Sbjct: 579 DVKKEIMQALRAVGAEFDDLNAKYREAEKEV 609