BLASTX nr result

ID: Papaver23_contig00032505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00032505
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535371.1| PREDICTED: uncharacterized protein At2g34160...    46   1e-07
ref|XP_002884455.1| nucleic acid binding protein [Arabidopsis ly...    45   3e-07
ref|NP_187113.1| Alba DNA/RNA-binding protein [Arabidopsis thali...    45   3e-07
emb|CAN60466.1| hypothetical protein VITISV_012496 [Vitis vinifera]    45   4e-07
gb|AFK40867.1| unknown [Lotus japonicus]                               42   5e-07

>ref|XP_003535371.1| PREDICTED: uncharacterized protein At2g34160-like [Glycine max]
          Length = 132

 Score = 45.8 bits (107), Expect(2) = 1e-07
 Identities = 21/26 (80%), Positives = 24/26 (92%)
 Frame = +1

Query: 73  NYSHKKNRIEVSNTKKPLFFNVDLAR 150
           N SHKKNRI+VSNTKKPLFF V+LA+
Sbjct: 13  NDSHKKNRIQVSNTKKPLFFYVNLAK 38



 Score = 34.7 bits (78), Expect(2) = 1e-07
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = +3

Query: 144 SKRYMHQHNKVELSALGMGCLT 209
           +KRY+ QHN+VELSALGM   T
Sbjct: 37  AKRYIQQHNEVELSALGMAIAT 58


>ref|XP_002884455.1| nucleic acid binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330295|gb|EFH60714.1| nucleic acid binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 164

 Score = 44.7 bits (104), Expect(2) = 3e-07
 Identities = 23/35 (65%), Positives = 29/35 (82%)
 Frame = +1

Query: 46  TSTSRT*EKNYSHKKNRIEVSNTKKPLFFNVDLAR 150
           T+T+ T E   +HKKNRI+VSNTKKPLFF V+LA+
Sbjct: 26  TTTTATVE---THKKNRIQVSNTKKPLFFYVNLAK 57



 Score = 34.7 bits (78), Expect(2) = 3e-07
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = +3

Query: 144 SKRYMHQHNKVELSALGMGCLT 209
           +KRY+ QHN+VELSALGM   T
Sbjct: 56  AKRYIQQHNEVELSALGMAITT 77


>ref|NP_187113.1| Alba DNA/RNA-binding protein [Arabidopsis thaliana]
           gi|6175166|gb|AAF04892.1|AC011437_7 unknown protein
           [Arabidopsis thaliana] gi|38454036|gb|AAR20712.1|
           At3g04620 [Arabidopsis thaliana]
           gi|38604012|gb|AAR24749.1| At3g04620 [Arabidopsis
           thaliana] gi|332640586|gb|AEE74107.1| Alba
           DNA/RNA-binding protein [Arabidopsis thaliana]
          Length = 164

 Score = 44.7 bits (104), Expect(2) = 3e-07
 Identities = 23/35 (65%), Positives = 29/35 (82%)
 Frame = +1

Query: 46  TSTSRT*EKNYSHKKNRIEVSNTKKPLFFNVDLAR 150
           T+T+ T E   +HKKNRI+VSNTKKPLFF V+LA+
Sbjct: 26  TTTTATVE---THKKNRIQVSNTKKPLFFYVNLAK 57



 Score = 34.7 bits (78), Expect(2) = 3e-07
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = +3

Query: 144 SKRYMHQHNKVELSALGMGCLT 209
           +KRY+ QHN+VELSALGM   T
Sbjct: 56  AKRYIQQHNEVELSALGMAITT 77


>emb|CAN60466.1| hypothetical protein VITISV_012496 [Vitis vinifera]
          Length = 161

 Score = 44.7 bits (104), Expect(2) = 4e-07
 Identities = 20/24 (83%), Positives = 23/24 (95%)
 Frame = +1

Query: 79  SHKKNRIEVSNTKKPLFFNVDLAR 150
           SHKKNRI+VSNTKKPLFF V+LA+
Sbjct: 16  SHKKNRIQVSNTKKPLFFYVNLAK 39



 Score = 34.3 bits (77), Expect(2) = 4e-07
 Identities = 15/21 (71%), Positives = 17/21 (80%)
 Frame = +3

Query: 147 KRYMHQHNKVELSALGMGCLT 209
           +RYM QHN+VELSALGM   T
Sbjct: 65  QRYMQQHNEVELSALGMAIAT 85


>gb|AFK40867.1| unknown [Lotus japonicus]
          Length = 136

 Score = 42.4 bits (98), Expect(2) = 5e-07
 Identities = 20/26 (76%), Positives = 23/26 (88%)
 Frame = +1

Query: 73  NYSHKKNRIEVSNTKKPLFFNVDLAR 150
           N S KKNRI+VSNTKKPLFF V+LA+
Sbjct: 18  NDSFKKNRIQVSNTKKPLFFYVNLAK 43



 Score = 36.2 bits (82), Expect(2) = 5e-07
 Identities = 16/22 (72%), Positives = 18/22 (81%)
 Frame = +3

Query: 144 SKRYMHQHNKVELSALGMGCLT 209
           +KRYM QHN+VELSALGM   T
Sbjct: 42  AKRYMQQHNEVELSALGMAIAT 63


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