BLASTX nr result

ID: Papaver23_contig00032358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00032358
         (1100 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    74   6e-11
ref|XP_003604036.1| Myb-like transcription factor [Medicago trun...    72   3e-10
ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis ...    69   2e-09
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...    69   2e-09
gb|EEC79285.1| hypothetical protein OsI_20087 [Oryza sativa Indi...    69   2e-09

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 73.9 bits (180), Expect = 6e-11
 Identities = 42/144 (29%), Positives = 64/144 (44%)
 Frame = -2

Query: 1084 WSKIWNMKVPPAVKIFVWKAAHSILPNSVRMAAKFPNIETSCKLCNNGDESLTHLFMQCN 905
            W KIW  K+PP VK+F WKA H+ L     M  +  NI+ +C  C   +E+  HL   C+
Sbjct: 1051 WQKIWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCD 1110

Query: 904  FVSQILMHLNFDMHYVVNRTNNFHDWLNDMYNNQDRNGDVMEWSAFCSIIIWHVWKAMYN 725
              S+        +H       +F  W+  +    D + D  EW A   +I W++W     
Sbjct: 1111 ESSRAWYISPLRIHTGNIEAGSFRIWVESLL---DTHKDT-EWWALFWMICWNIWLGRNK 1166

Query: 724  LVFQKIKHNNAETTQSVTKYINSF 653
             VF+K K    E  +   + +  F
Sbjct: 1167 WVFEKKKLAFQEVVERAVRGVMEF 1190


>ref|XP_003604036.1| Myb-like transcription factor [Medicago truncatula]
            gi|355493084|gb|AES74287.1| Myb-like transcription factor
            [Medicago truncatula]
          Length = 313

 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 7/127 (5%)
 Frame = -2

Query: 1075 IWNMKVPPAVKIFVWKAAHSILPNSVRMAAKF---PNIETSCKLCNNGDESLTHLFMQCN 905
            IW   VP  V +FVWKA    +P  + +  +    P+I T+C  C  G E+ +H+F+ C+
Sbjct: 9    IWKAGVPSKVTVFVWKALLDRIPTRLNLEIRHCLPPDIGTNCVWCGVGVETTSHIFLHCD 68

Query: 904  FVSQILMHLN--FDMHYVV--NRTNNFHDWLNDMYNNQDRNGDVMEWSAFCSIIIWHVWK 737
             V  + M L    D ++++  N   ++  W    +NN+ R G  M W A     IW +WK
Sbjct: 69   LVRNVWMKLMEWLDFNFIMPPNLFIHWECWSGGAWNNRIRKGLRMIWQA----AIWVMWK 124

Query: 736  AMYNLVF 716
            A  N +F
Sbjct: 125  ARNNCIF 131


>ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis thaliana]
            gi|6682231|gb|AAF23283.1|AC016661_8 putative non-LTR
            reverse transcriptase [Arabidopsis thaliana]
            gi|332641254|gb|AEE74775.1| RNase H domain-containing
            protein [Arabidopsis thaliana]
          Length = 484

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 35/150 (23%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
 Frame = -2

Query: 1081 SKIWNMKVPPAVKIFVWKAAHSILPNSVRMAAKFPNIETSCKLCNNGDESLTHLFMQCNF 902
            ++IWN+ + P +K F+W+A    L  + R+  +   I+ SC  C+  +ES+ H    C F
Sbjct: 160  TRIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPF 219

Query: 901  VSQILMHLNFDMHYVVNRTNNFHDWLNDMYNNQDRNGDVMEWSAFCSI-IIWHVWKAMYN 725
             +      +  +      +N+F + ++++ N   ++  + ++     + +IW +WKA  N
Sbjct: 220  ATMAWRLSDSSLIRNQLMSNDFEENISNILNFV-QDTTMSDFHKLLPVWLIWRIWKARNN 278

Query: 724  LVFQKIKHNNAETTQSVTKYINSFMNVSNS 635
            +VF K + + ++T  S     + ++N + S
Sbjct: 279  VVFNKFRESPSKTVLSAKAETHDWLNATQS 308


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 35/150 (23%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
 Frame = -2

Query: 1081 SKIWNMKVPPAVKIFVWKAAHSILPNSVRMAAKFPNIETSCKLCNNGDESLTHLFMQCNF 902
            ++IWN+ + P +K F+W+A    L  + R+  +   I+ SC  C+  +ES+ H    C F
Sbjct: 1426 TRIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPF 1485

Query: 901  VSQILMHLNFDMHYVVNRTNNFHDWLNDMYNNQDRNGDVMEWSAFCSI-IIWHVWKAMYN 725
             +      +  +      +N+F + ++++ N   ++  + ++     + +IW +WKA  N
Sbjct: 1486 ATMAWRLSDSSLIRNQLMSNDFEENISNILNFV-QDTTMSDFHKLLPVWLIWRIWKARNN 1544

Query: 724  LVFQKIKHNNAETTQSVTKYINSFMNVSNS 635
            +VF K + + ++T  S     + ++N + S
Sbjct: 1545 VVFNKFRESPSKTVLSAKAETHDWLNATQS 1574


>gb|EEC79285.1| hypothetical protein OsI_20087 [Oryza sativa Indica Group]
            gi|218196859|gb|EEC79286.1| hypothetical protein
            OsI_20088 [Oryza sativa Indica Group]
          Length = 216

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 28/77 (36%), Positives = 44/77 (57%)
 Frame = -2

Query: 1099 SNNMDWSKIWNMKVPPAVKIFVWKAAHSILPNSVRMAAKFPNIETSCKLCNNGDESLTHL 920
            ++ + W KIWNM+VP  +K+FVW+ AH+ LP    +  +    +  C +CN  DE   HL
Sbjct: 103  ADTLQWEKIWNMEVPNKIKMFVWRLAHNSLPVRCNIRRRGMESDNLCPMCNRFDEDCGHL 162

Query: 919  FMQCNFVSQILMHLNFD 869
            F++C  V +    LN +
Sbjct: 163  FLKCKGVKECWRSLNLE 179


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