BLASTX nr result

ID: Papaver23_contig00032313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00032313
         (744 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146533.1| PREDICTED: 2-C-methyl-D-erythritol 2,4-cyclo...   108   2e-21
ref|NP_850971.1| 2-C-methyl-D-erythritol 2,4-cyclodiphosphate sy...   107   3e-21
pdb|2PMP|A Chain A, Structure Of 2c-Methyl-D-Erythritol 2,4-Cycl...   107   3e-21
dbj|BAF81514.1| 2C-methyl-D-erythritol 2,4-cyclodiphosphate [Bra...   107   3e-21
gb|AAM62786.1| 2C-methyl-D-erythritol 2,4-cyclodiphosphate synth...   106   6e-21

>ref|XP_004146533.1| PREDICTED: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase,
           chloroplastic-like [Cucumis sativus]
          Length = 233

 Score =  108 bits (269), Expect = 2e-21
 Identities = 54/94 (57%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
 Frame = +1

Query: 349 LKKLSSQATLPFRIGHGFDIQKLVPAYPWIIGGQYIRHSLGCEASPKADVLYQSIVDAIL 528
           +K  S   TLPFR+GHGFD+ +L P YP IIGG  I H  GCEA    DVL   +VDAIL
Sbjct: 66  IKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDAIL 125

Query: 529 GALGLPDAEEMFPWFNPKWDGASS--FVAEAVKL 624
           GALGLPD  ++FP  +PKW GA+S  F+ EAV+L
Sbjct: 126 GALGLPDIGQIFPDSDPKWKGAASSVFIKEAVRL 159


>ref|NP_850971.1| 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Arabidopsis
           thaliana] gi|27805483|sp|Q9CAK8.1|ISPF_ARATH RecName:
           Full=2-C-methyl-D-erythritol 2,4-cyclodiphosphate
           synthase, chloroplastic; Short=MECDP-synthase;
           Short=MECPS; Short=MECS; Flags: Precursor
           gi|12325003|gb|AAG52445.1|AC010852_2 unknown protein;
           376-1789 [Arabidopsis thaliana]
           gi|13877783|gb|AAK43969.1|AF370154_1 unknown protein
           [Arabidopsis thaliana] gi|16323416|gb|AAL15202.1|
           unknown protein [Arabidopsis thaliana]
           gi|332196053|gb|AEE34174.1| 2-C-methyl-D-erythritol
           2,4-cyclodiphosphate synthase [Arabidopsis thaliana]
          Length = 231

 Score =  107 bits (266), Expect = 3e-21
 Identities = 53/86 (61%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
 Frame = +1

Query: 373 TLPFRIGHGFDIQKLVPAYPWIIGGQYIRHSLGCEASPKADVLYQSIVDAILGALGLPDA 552
           TLPFRIGHGFD+ +L P YP IIGG  I H  GCEA    DVL   +VDAILGALGLPD 
Sbjct: 72  TLPFRIGHGFDLHRLEPGYPLIIGGIVIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDI 131

Query: 553 EEMFPWFNPKWDGASS--FVAEAVKL 624
            ++FP  +PKW GA+S  F+ EAV+L
Sbjct: 132 GQIFPDSDPKWKGAASSVFIKEAVRL 157


>pdb|2PMP|A Chain A, Structure Of 2c-Methyl-D-Erythritol 2,4-Cyclodiphosphate
           Synthase From The Isoprenoid Biosynthetic Pathway Of
           Arabidopsis Thaliana
          Length = 160

 Score =  107 bits (266), Expect = 3e-21
 Identities = 53/86 (61%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
 Frame = +1

Query: 373 TLPFRIGHGFDIQKLVPAYPWIIGGQYIRHSLGCEASPKADVLYQSIVDAILGALGLPDA 552
           TLPFRIGHGFD+ +L P YP IIGG  I H  GCEA    DVL   +VDAILGALGLPD 
Sbjct: 1   TLPFRIGHGFDLHRLEPGYPLIIGGIVIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDI 60

Query: 553 EEMFPWFNPKWDGASS--FVAEAVKL 624
            ++FP  +PKW GA+S  F+ EAV+L
Sbjct: 61  GQIFPDSDPKWKGAASSVFIKEAVRL 86


>dbj|BAF81514.1| 2C-methyl-D-erythritol 2,4-cyclodiphosphate [Brassica rapa]
          Length = 230

 Score =  107 bits (266), Expect = 3e-21
 Identities = 55/96 (57%), Positives = 67/96 (69%), Gaps = 2/96 (2%)
 Frame = +1

Query: 343 QPLKKLSSQATLPFRIGHGFDIQKLVPAYPWIIGGQYIRHSLGCEASPKADVLYQSIVDA 522
           +P+KK     TLPFR+GHGFD+ +L P YP IIGG  I H  GCEA    DVL   +VDA
Sbjct: 63  EPVKK--PVRTLPFRVGHGFDLHRLEPGYPLIIGGIDIPHDRGCEAHSDGDVLLHCVVDA 120

Query: 523 ILGALGLPDAEEMFPWFNPKWDGASS--FVAEAVKL 624
           ILGALGLPD  ++FP  +PKW GA+S  F+ EAV+L
Sbjct: 121 ILGALGLPDIGQIFPDSDPKWKGAASSVFIKEAVRL 156


>gb|AAM62786.1| 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Arabidopsis
           thaliana]
          Length = 231

 Score =  106 bits (264), Expect = 6e-21
 Identities = 53/86 (61%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
 Frame = +1

Query: 373 TLPFRIGHGFDIQKLVPAYPWIIGGQYIRHSLGCEASPKADVLYQSIVDAILGALGLPDA 552
           TLPFRIGHGFD+ +L P YP IIGG  I H  GCEA    DVL   +VDAILGALGLPD 
Sbjct: 72  TLPFRIGHGFDLHRLEPGYPLIIGGIDIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDI 131

Query: 553 EEMFPWFNPKWDGASS--FVAEAVKL 624
            ++FP  +PKW GA+S  F+ EAV+L
Sbjct: 132 GQIFPDSDPKWKGAASSVFIKEAVRL 157


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