BLASTX nr result

ID: Papaver23_contig00032276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00032276
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    92   5e-17
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    92   7e-17
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta...    89   6e-16
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    87   1e-15
gb|ABA98327.2| transposon protein, putative, CACTA, En/Spm sub-c...    87   2e-15

>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 92.0 bits (227), Expect = 5e-17
 Identities = 49/170 (28%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
 Frame = +1

Query: 46  LQDNNPRVINLKH------DLEKWYNFEEAFWKTKATDNQLNLGDKNTGYFHSTSTYRAR 207
           LQ  +P    L+       DL++ +  EE++W  +A  N++  GDKNT YFH  ++ R R
Sbjct: 308 LQQRDPDASTLEQCRIVSGDLDEIHRLEESYWHARARANEIRDGDKNTKYFHHKASQRKR 367

Query: 208 KLRVEEIQNIDGSWSKDRKGIVDTFYNHFSSMATSSKPNISDKILDLIPSCLNELDNEKL 387
           +  + E+ + +G W K R+ I     ++F  +  +  P   +  L+ +  C++   N  L
Sbjct: 368 RNTINELLDENGVWKKGREEICGVVQHYFEGLFATDSPVNMELALEGLSHCVSTDMNTAL 427

Query: 388 MAKPSELEIKLVVFDMHPNKSPGPDEFTMEFYKDV*DIVKFDLMAVIKEF 537
           +  PS  E+K  +F MHPNK+PG D     F++    I+  D+++ ++ +
Sbjct: 428 LMLPSGDEVKEALFAMHPNKAPGIDGLHALFFQKFWHILGSDVISFVQSW 477


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 91.7 bits (226), Expect = 7e-17
 Identities = 43/150 (28%), Positives = 84/150 (56%)
 Frame = +1

Query: 88  LEKWYNFEEAFWKTKATDNQLNLGDKNTGYFHSTSTYRARKLRVEEIQNIDGSWSKDRKG 267
           L++ Y  EE +W  K+    + LGD N+ +FH+ +  R  + R+  + + +G WS +   
Sbjct: 109 LKEAYRDEEQYWYQKSRSLWMKLGDNNSKFFHALTKQRRARNRITGLHDENGIWSIEDDD 168

Query: 268 IVDTFYNHFSSMATSSKPNISDKILDLIPSCLNELDNEKLMAKPSELEIKLVVFDMHPNK 447
           I +   ++F ++ T++ P + D+ L  +   + +  N+ L A  +E E++  +F +HP K
Sbjct: 169 IQNIAVSYFQNLFTTANPQVFDEALGEVQVLITDRINDLLTADATECEVRAALFMIHPEK 228

Query: 448 SPGPDEFTMEFYKDV*DIVKFDLMAVIKEF 537
           +PGPD  T  F++    I+K DL++++  F
Sbjct: 229 APGPDGMTALFFQKSWAIIKSDLLSLVNSF 258


>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1229

 Score = 88.6 bits (218), Expect = 6e-16
 Identities = 59/191 (30%), Positives = 91/191 (47%), Gaps = 11/191 (5%)
 Frame = +1

Query: 13  QNLNHAK----------NNLNLQDNNPRVIN-LKHDLEKWYNFEEAFWKTKATDNQLNLG 159
           QNLN A+            L     NP  I  L   LE  Y  EE FWK ++    L+ G
Sbjct: 184 QNLNSAELIEKTQKALEEALTADPPNPTTIGALTATLEHAYKLEEQFWKQRSRVLWLHSG 243

Query: 160 DKNTGYFHSTSTYRARKLRVEEIQNIDGSWSKDRKGIVDTFYNHFSSMATSSKPNISDKI 339
           D+NTGYFH+ +  R  + R+  +++I+G    +   I      +F  + TS        +
Sbjct: 244 DRNTGYFHAVTRNRRTQNRLTVMEDINGVAQHEEHQISQIISGYFQQIFTSESDGDFSVV 303

Query: 340 LDLIPSCLNELDNEKLMAKPSELEIKLVVFDMHPNKSPGPDEFTMEFYKDV*DIVKFDLM 519
            + I   +++ DN+ L   P++ E+K  VF ++ +K+PGPD FT  FY     I+  D+ 
Sbjct: 304 DEAIEPMVSQGDNDFLTRIPNDEEVKDAVFSINASKAPGPDGFTAGFYHSYWHIISTDVG 363

Query: 520 AVIKEFKTCGN 552
             I+ F T  N
Sbjct: 364 REIRLFFTSKN 374


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 53/171 (30%), Positives = 91/171 (53%), Gaps = 3/171 (1%)
 Frame = +1

Query: 1    KKLTQNLNHAKNNLNLQDNNPRVINLKHDLEKWYNFEEAFWKTKATDNQLNLGDKNTGYF 180
            KK+ + L   +     +D   R   L++ LEK     + +WK +A  N LN GD+NT +F
Sbjct: 552  KKVKKELETCRRQPISRDQVVREEVLRYRLEKLEQQVDIYWKQRAHTNWLNKGDRNTSFF 611

Query: 181  HSTSTYRARKLRVEEIQNIDGSW---SKDRKGIVDTFYNHFSSMATSSKPNISDKILDLI 351
            H++ + R R+ R+ +++  DGSW    +D++ ++  F   F  + TS+    S K+LD++
Sbjct: 612  HASCSERRRRNRINKLRREDGSWVEREEDKRAMIIEF---FKQLFTSNGGQNSQKLLDVV 668

Query: 352  PSCLNELDNEKLMAKPSELEIKLVVFDMHPNKSPGPDEFTMEFYKDV*DIV 504
               ++   NE L A+ +  E+K  +  +   K+PGPD     FYK   D+V
Sbjct: 669  DRKVSGAMNESLRAEFTREEVKEALDAIGDLKAPGPDGMPAGFYKACWDVV 719


>gb|ABA98327.2| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
            Japonica Group]
          Length = 2042

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 2/145 (1%)
 Frame = +1

Query: 109  EEAFWKTKATDNQLNLGDKNTGYFHSTSTYRARKLRVEEIQNIDGS--WSKDRKGIVDTF 282
            EE  W  +A  + + LGD NT Y+H  +  + RK R+  +   +G   W++  K  +  F
Sbjct: 1504 EEIKWYQRAKTDDVRLGDNNTKYYHLIANGKHRKKRIFSLDQEEGKIEWNEAIKNYITEF 1563

Query: 283  YNHFSSMATSSKPNISDKILDLIPSCLNELDNEKLMAKPSELEIKLVVFDMHPNKSPGPD 462
            Y        +S  +     +D IP  + E +N+ L+A  SE E++  +FDM  NK+PGPD
Sbjct: 1564 YKKLFGPPDASTLSFDANRIDDIPQ-VTEAENDHLIAPFSEEEVREAIFDMETNKAPGPD 1622

Query: 463  EFTMEFYKDV*DIVKFDLMAVIKEF 537
                EFY+    ++K DL+ +  EF
Sbjct: 1623 GILAEFYQKFWHVIKHDLLTMFNEF 1647


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