BLASTX nr result

ID: Papaver23_contig00032223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00032223
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002337584.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
gb|AFZ78585.1| cellulose synthase-like protein [Populus tomentosa]     57   2e-06

>ref|XP_002337584.1| predicted protein [Populus trichocarpa] gi|222839621|gb|EEE77944.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/100 (35%), Positives = 47/100 (47%)
 Frame = -2

Query: 428 LMSKKPNYEFQEWWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKEGGR 249
           + S+  NYEFQEWW                                          + G 
Sbjct: 1   MSSRAQNYEFQEWWNKHREFLDKPENTAFLTVEIHSPTV-----------------DKGH 43

Query: 248 SRNARQISFVILLKFQQISNLLAWLINGFCSLIRTTNRRI 129
           +R+ARQ+S++ LLKFQQ++  LAWL +GF  L+RTTNRRI
Sbjct: 44  TRSARQLSWLWLLKFQQLATSLAWLTDGFIDLVRTTNRRI 83


>gb|AFZ78585.1| cellulose synthase-like protein [Populus tomentosa]
          Length = 678

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/101 (33%), Positives = 47/101 (46%)
 Frame = -2

Query: 428 LMSKKPNYEFQEWWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKEGGR 249
           + S+  N+EFQEWW                                          + G 
Sbjct: 1   MSSQAQNHEFQEWWNKQRGFLDKPDSTAFLTVEIRNPTSDPTV-------------DKGH 47

Query: 248 SRNARQISFVILLKFQQISNLLAWLINGFCSLIRTTNRRIT 126
           +R+ARQ+S++ LLKFQQ++  LAWL NG  SL+RT NRRI+
Sbjct: 48  TRSARQLSWLWLLKFQQLATSLAWLTNGSVSLLRTANRRIS 88


Top