BLASTX nr result

ID: Papaver23_contig00032221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00032221
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1...    84   1e-14
gb|AAD17395.1| putative non-LTR retroelement reverse transcripta...    81   8e-14
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    77   1e-12
gb|EAZ07429.1| hypothetical protein OsI_29683 [Oryza sativa Indi...    77   1e-12
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    74   2e-11

>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) -
           Arabidopsis thaliana retrotransposon Ta11-1
           gi|976278|gb|AAA75254.1| reverse transcriptase
           [Arabidopsis thaliana]
          Length = 1333

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 46/145 (31%), Positives = 73/145 (50%)
 Frame = -1

Query: 454 VGLSGGLVVAWKIGTKLRIGFYCDNMINCHLTDNASKKECVILCVYGPSVWKQKLSFWSY 275
           +GLSGGL + WK G  + I +   N+I+  +       E  + CVYG   +  K   W  
Sbjct: 64  IGLSGGLALFWKKGVDIVIKYADKNLIDFQI--QFGSHEFYVSCVYGNPAFSDKHLVWEK 121

Query: 274 ITQQHQFGDKEWLVIGDLNLTLHAHEKKGSGYFNGSEATKIVDLLTMANLYDIGYVGYPF 95
           IT+      + W ++GD N  LH  EK+G      S      D+L   ++ ++  +G PF
Sbjct: 122 ITRIGINRKEPWCMLGDFNPILHNGEKRGGPRRGDSSFLPFTDMLDSCDMLELPSIGNPF 181

Query: 94  TWTNKRADAELTEARIDRGFGNQHW 20
           TW  K  +  + ++R+DR FGN++W
Sbjct: 182 TWGGKTNEMWI-QSRLDRCFGNKNW 205


>gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1138

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 44/145 (30%), Positives = 73/145 (50%)
 Frame = -1

Query: 454 VGLSGGLVVAWKIGTKLRIGFYCDNMINCHLTDNASKKECVILCVYGPSVWKQKLSFWSY 275
           VGLSGGL + WK G  + + +   N+I+  +       +  + CVYG   +  K   W  
Sbjct: 28  VGLSGGLALFWKKGVNIDVRYADKNLIDFQI--QFGSYDFFVSCVYGDPAFSNKHLVWEK 85

Query: 274 ITQQHQFGDKEWLVIGDLNLTLHAHEKKGSGYFNGSEATKIVDLLTMANLYDIGYVGYPF 95
           I++      + W ++GD N+ LH  EK+G      S      D+L   ++ ++   G PF
Sbjct: 86  ISKIGLNRKEPWCMLGDFNVILHNGEKRGGPRRGDSSFISFKDMLECCDMLELPSKGNPF 145

Query: 94  TWTNKRADAELTEARIDRGFGNQHW 20
           +W  KR ++   + R+DR FGN++W
Sbjct: 146 SWGGKR-NSLWIQCRLDRCFGNKNW 169


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 1/147 (0%)
 Frame = -1

Query: 451 GLSGGLVVAWKIGTKL-RIGFYCDNMINCHLTDNASKKECVILCVYGPSVWKQKLSFWSY 275
           G  GG+ + WK    L     Y  N  +      +   E ++  ++ PSV  ++  +W  
Sbjct: 63  GKRGGIWLMWKADIALVHYADYQPNHFHALFKLRSDIPEVLLTGMHAPSVVSERNKYWVD 122

Query: 274 ITQQHQFGDKEWLVIGDLNLTLHAHEKKGSGYFNGSEATKIVDLLTMANLYDIGYVGYPF 95
           +T+        WLV GD+N  LH +EK G       +  +  D +    L D+G+ G  F
Sbjct: 123 LTEDSPPRGTPWLVAGDMNEVLHGNEKMGGRQVGKEQGKQCKDWIAANALLDLGFQGPKF 182

Query: 94  TWTNKRADAELTEARIDRGFGNQHWTD 14
           TWTN R    L + R+DR   N  W D
Sbjct: 183 TWTNGRTGGSLIKERLDRALVNSEWLD 209


>gb|EAZ07429.1| hypothetical protein OsI_29683 [Oryza sativa Indica Group]
          Length = 318

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 41/146 (28%), Positives = 68/146 (46%)
 Frame = -1

Query: 451 GLSGGLVVAWKIGTKLRIGFYCDNMINCHLTDNASKKECVILCVYGPSVWKQKLSFWSYI 272
           GLSGGL + W     + I    D  I+ ++  + +     I CVYG    + +   W ++
Sbjct: 44  GLSGGLALFWHESFNVEIKSVNDRFIDAYIRVSPTAPLWHISCVYGEPRTENRHLMWQHL 103

Query: 271 TQQHQFGDKEWLVIGDLNLTLHAHEKKGSGYFNGSEATKIVDLLTMANLYDIGYVGYPFT 92
           +   Q     W+V+GD N  L   E       +  +     D+L + NL D+G+ G PFT
Sbjct: 104 SSLRQSSTLPWVVLGDFNEALWQFEHLSKNPRSEIQMQAFRDVLDVCNLIDLGFEGNPFT 163

Query: 91  WTNKRADAELTEARIDRGFGNQHWTD 14
           + N+R  +   + R+DR   ++ W D
Sbjct: 164 YDNRRKGSNNVQVRLDRVVADESWRD 189


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/147 (27%), Positives = 68/147 (46%)
 Frame = -1

Query: 454 VGLSGGLVVAWKIGTKLRIGFYCDNMINCHLTDNASKKECVILCVYGPSVWKQKLSFWSY 275
           +G SGGL + WK   ++++      +I+  L      KE  + C+YG  V  ++   W  
Sbjct: 62  IGKSGGLALMWKDSVQIKVLQSDKRLIDALLI--WQDKEFYLTCIYGEPVQAERGELWER 119

Query: 274 ITQQHQFGDKEWLVIGDLNLTLHAHEKKGSGYFNGSEATKIVDLLTMANLYDIGYVGYPF 95
           +T+        W++ GD N  +   EK G      S   +   +L    L+++ + GY F
Sbjct: 120 LTRLGLSRSGPWMLTGDFNELVDPSEKIGGPARKESSCLEFRQMLNSCGLWEVNHSGYQF 179

Query: 94  TWTNKRADAELTEARIDRGFGNQHWTD 14
           +W   R D EL + R+DR   NQ W +
Sbjct: 180 SWYGNRND-ELVQCRLDRTVANQAWME 205


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