BLASTX nr result

ID: Papaver23_contig00032053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00032053
         (740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270990.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
ref|NP_001054633.1| Os05g0145600 [Oryza sativa Japonica Group] g...    57   3e-06
ref|XP_003524728.1| PREDICTED: pentatricopeptide repeat-containi...    56   7e-06
ref|XP_003553289.1| PREDICTED: pentatricopeptide repeat-containi...    56   9e-06

>ref|XP_002270990.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35850,
           mitochondrial [Vitis vinifera]
           gi|296087577|emb|CBI34833.3| unnamed protein product
           [Vitis vinifera]
          Length = 445

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
 Frame = -1

Query: 242 AVTHEQYDRGI*VNYVFEHTIICSSLTSQSKSILLLGAYSDMILDGVQPSRDSFH----- 78
           A + E+Y +    + V E+T + SSLT+Q +  LL  AY DM+LDGVQPSRD FH     
Sbjct: 26  AASTEEYAKRNYASNVSEYTTVVSSLTAQRRHFLLRDAYDDMMLDGVQPSRDIFHSLIVG 85

Query: 77  *KERARSQDAFILMIKRK 24
             + AR QD+F  + + K
Sbjct: 86  TMKGARLQDSFFFIDQMK 103


>ref|NP_001054633.1| Os05g0145600 [Oryza sativa Japonica Group]
           gi|51038158|gb|AAT93961.1| unknow protein [Oryza sativa
           Japonica Group] gi|51038198|gb|AAT94001.1| unkonw
           protein [Oryza sativa Japonica Group]
           gi|113578184|dbj|BAF16547.1| Os05g0145600 [Oryza sativa
           Japonica Group] gi|215686674|dbj|BAG88927.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222630177|gb|EEE62309.1| hypothetical protein
           OsJ_17098 [Oryza sativa Japonica Group]
          Length = 454

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
 Frame = -1

Query: 245 VAVTHEQYDRGI*VNYVFEHTIICSSLTSQSKSILLLGAYSDMILDGVQPSRDSFH---- 78
           VA + E+Y+R    N + E+  +  SLT+Q +  LL  AY DM+LDGVQP RD+FH    
Sbjct: 32  VATSTEEYNRRNYANNISEYNTVFGSLTAQRRHYLLRDAYDDMMLDGVQPVRDTFHNLIV 91

Query: 77  -*KERARSQDAFILMIKRKQ 21
              + +R QDAF    + K+
Sbjct: 92  GAMKGSRLQDAFYFRDQMKE 111


>ref|XP_003524728.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35850,
           mitochondrial-like [Glycine max]
          Length = 450

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
 Frame = -1

Query: 242 AVTHEQYDRGI*VNYVFEHTIICSSLTSQSKSILLLGAYSDMILDGVQPSRDSFH----- 78
           +V+ E+Y +    N V E+  +  SLT+Q ++ LL   Y DM+LDGV+P+RD+FH     
Sbjct: 30  SVSTEEYSKRNYANNVAEYNTVLGSLTAQRRNFLLRDVYDDMMLDGVKPTRDTFHSLVVG 89

Query: 77  *KERARSQDAFILMIKRK 24
             + AR QDAF  + + K
Sbjct: 90  TMKGARMQDAFYFVEQMK 107


>ref|XP_003553289.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35850,
           mitochondrial-like [Glycine max]
          Length = 450

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
 Frame = -1

Query: 242 AVTHEQYDRGI*VNYVFEHTIICSSLTSQSKSILLLGAYSDMILDGVQPSRDSFH----- 78
           +V+ E+Y +    N V E+  +  SLT+Q ++ LL   Y DM+LDGV+P+RD+FH     
Sbjct: 30  SVSTEEYSKRNYANNVAEYNTVLGSLTAQRRNFLLRDVYDDMMLDGVKPTRDTFHSLAVG 89

Query: 77  *KERARSQDAF 45
             + AR QDAF
Sbjct: 90  TMKAARMQDAF 100


Top