BLASTX nr result
ID: Papaver23_contig00032043
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00032043
(603 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-a... 99 6e-19
ref|XP_002308876.1| chromatin remodeling complex subunit [Populu... 89 6e-16
gb|EEE67677.1| hypothetical protein OsJ_25316 [Oryza sativa Japo... 87 2e-15
ref|NP_001060436.1| Os07g0642400 [Oryza sativa Japonica Group] g... 87 2e-15
ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|2026... 86 4e-15
>ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 3-like 1-like
[Vitis vinifera]
Length = 874
Score = 99.0 bits (245), Expect = 6e-19
Identities = 75/219 (34%), Positives = 110/219 (50%), Gaps = 20/219 (9%)
Frame = -1
Query: 600 ENCYVNSALICMEWFRVILDDAHVLRRWNFKD-QKLLNLRAKCRWVVTGMPAAQTICITP 424
E + S + +EW+RVILD+AH+++ N + Q + NLRAK RWVVTG P Q
Sbjct: 413 EEAWSGSPVKKIEWWRVILDEAHMIKNVNAQQSQAVTNLRAKRRWVVTGTPI-QNGTFDL 471
Query: 423 WLF*GSIHFQSSTIGKSWCKTFLIKERLGSH----ICRTW*QPFC*ED*KLTVWSYCLR- 259
+ + F+ +I W L++ LG + R ++ + + LR
Sbjct: 472 FSLMAFLRFEPFSIKSYWQS--LVQRPLGQGKEKGLSRL----------QVLMATISLRR 519
Query: 258 -----------KLLRLFIWSFSDEERVEYDQKELDSREVVKTYIRHGRAVAQYSSILAIV 112
K + S EER YDQ E + + V++ YI G + YS++L I+
Sbjct: 520 TKDKGLIGLPPKSVETCFVELSAEERELYDQMEAEGKCVIRDYIDAGSVMRNYSTVLGII 579
Query: 111 QRLRELCNDVASCTSELPK---SVNIEDVSKNPELLQKL 4
RLR++C DVA C S+L S NIEDVS NPELL+K+
Sbjct: 580 LRLRQICTDVALCPSDLRSLLLSNNIEDVSNNPELLKKM 618
>ref|XP_002308876.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222854852|gb|EEE92399.1| chromatin remodeling complex
subunit [Populus trichocarpa]
Length = 799
Score = 89.0 bits (219), Expect = 6e-16
Identities = 68/216 (31%), Positives = 107/216 (49%), Gaps = 16/216 (7%)
Frame = -1
Query: 603 AENCYVNSALICMEWFRVILDDAHVLRRWNFKDQKLLN-LRAKCRWVVTGMPAAQTICIT 427
AE+ + +S + ++W RVILD+AHV++ N + + + L AK RWVVTG P Q +
Sbjct: 337 AEDPWEDSPVKKIDWCRVILDEAHVIKNANSQQSRAVTKLNAKRRWVVTGTPI-QNGSLD 395
Query: 426 PWLF*GSIHFQSSTIGKSWCKTFLIKERLGSHICRTW*QPFC*ED*KLTVWSYCLR---- 259
+ + F+ +I W G+ + Q + + + LR
Sbjct: 396 LFSLMAFLRFEPFSIKSYWQSLLQRPLAQGNKKGLSRLQ--------VLMATISLRRTKD 447
Query: 258 --------KLLRLFIWSFSDEERVEYDQKELDSREVVKTYIRHGRAVAQYSSILAIVQRL 103
K + S EER YDQ E +++ VV+ +I + +S++L I+ RL
Sbjct: 448 KGVVGLPSKTVETHYIELSGEERELYDQMEAEAKGVVQNFINTNNLMRNFSTVLCIILRL 507
Query: 102 RELCNDVASCTSELPK---SVNIEDVSKNPELLQKL 4
R++CND+A C S+L S +IEDVS NPELL K+
Sbjct: 508 RQICNDLALCPSDLRSLLPSNSIEDVSNNPELLMKM 543
>gb|EEE67677.1| hypothetical protein OsJ_25316 [Oryza sativa Japonica Group]
Length = 641
Score = 87.0 bits (214), Expect = 2e-15
Identities = 68/205 (33%), Positives = 101/205 (49%), Gaps = 17/205 (8%)
Frame = -1
Query: 567 MEWFRVILDDAHVLRRWNFKDQK-LLNLRAKCRWVVTGMPAAQTICITPWLF*GSIHFQS 391
+EWFRVILD+AHV++ + K ++ L A+ RWVVTG P Q + + FQ
Sbjct: 181 IEWFRVILDEAHVIKNSAARQTKAVIALNAERRWVVTGTPI-QNSSFDLYPLMAFLRFQP 239
Query: 390 STIGKSWCKTFLIK-ERLGSHICRTW*QPFC*----------ED*KLTVWSYCLRKLLRL 244
+I W + ER + I Q E ++ S + +L
Sbjct: 240 FSIKSYWQSLIQLPLERKNNGIGLARLQSLLGAISLRRTKETESGSKSLVSIPPKTVLAC 299
Query: 243 FIWSFSDEERVEYDQKELDSREVVKTYIRHGRAVAQYSSILAIVQRLRELCNDVASCTSE 64
+I S EER YDQ EL+ + ++ + + YS++L + RLR+LCND+A C +
Sbjct: 300 YI-ELSAEEREYYDQMELEGKNKLREFGDRDSILRNYSTVLYFILRLRQLCNDIALCPLD 358
Query: 63 LP-----KSVNIEDVSKNPELLQKL 4
L ++EDVSKNPELL+KL
Sbjct: 359 LKSWLPGSGSSLEDVSKNPELLKKL 383
>ref|NP_001060436.1| Os07g0642400 [Oryza sativa Japonica Group]
gi|23237908|dbj|BAC16482.1| putative RUSH-1alpha [Oryza
sativa Japonica Group] gi|50509930|dbj|BAD30251.1|
putative RUSH-1alpha [Oryza sativa Japonica Group]
gi|113611972|dbj|BAF22350.1| Os07g0642400 [Oryza sativa
Japonica Group]
Length = 821
Score = 87.0 bits (214), Expect = 2e-15
Identities = 68/205 (33%), Positives = 101/205 (49%), Gaps = 17/205 (8%)
Frame = -1
Query: 567 MEWFRVILDDAHVLRRWNFKDQK-LLNLRAKCRWVVTGMPAAQTICITPWLF*GSIHFQS 391
+EWFRVILD+AHV++ + K ++ L A+ RWVVTG P Q + + FQ
Sbjct: 361 IEWFRVILDEAHVIKNSAARQTKAVIALNAERRWVVTGTPI-QNSSFDLYPLMAFLRFQP 419
Query: 390 STIGKSWCKTFLIK-ERLGSHICRTW*QPFC*----------ED*KLTVWSYCLRKLLRL 244
+I W + ER + I Q E ++ S + +L
Sbjct: 420 FSIKSYWQSLIQLPLERKNNGIGLARLQSLLGAISLRRTKETESGSKSLVSIPPKTVLAC 479
Query: 243 FIWSFSDEERVEYDQKELDSREVVKTYIRHGRAVAQYSSILAIVQRLRELCNDVASCTSE 64
+I S EER YDQ EL+ + ++ + + YS++L + RLR+LCND+A C +
Sbjct: 480 YI-ELSAEEREYYDQMELEGKNKLREFGDRDSILRNYSTVLYFILRLRQLCNDIALCPLD 538
Query: 63 LP-----KSVNIEDVSKNPELLQKL 4
L ++EDVSKNPELL+KL
Sbjct: 539 LKSWLPGSGSSLEDVSKNPELLKKL 563
>ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|20260624|gb|AAM13210.1|
helicase-like transcription factor-like protein
[Arabidopsis thaliana] gi|31711770|gb|AAP68241.1|
At5g05130 [Arabidopsis thaliana]
gi|332003449|gb|AED90832.1| DNA/RNA helicase [Arabidopsis
thaliana]
Length = 862
Score = 86.3 bits (212), Expect = 4e-15
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 16/215 (7%)
Frame = -1
Query: 600 ENCYVNSALICMEWFRVILDDAHVLRRWNFKDQKLL-NLRAKCRWVVTGMPAAQTICITP 424
E + +S + MEW R+ILD+AH ++ N + +++ L+A RW VTG P Q
Sbjct: 399 EESWEDSPVKKMEWLRIILDEAHTIKNANAQQSRVVCKLKASRRWAVTGTPI-QNGSFDL 457
Query: 423 WLF*GSIHFQSSTIGKSWCKTFLIKERLGSHICRTW*QPFC*ED*KLTVWSYCLR----- 259
+ + F+ +I W LI+ LG + + ++ + + LR
Sbjct: 458 YSLMAFLRFEPFSIKSYWQS--LIQRPLGQGNKKGLSRL------QVLMATISLRRTKEK 509
Query: 258 -------KLLRLFIWSFSDEERVEYDQKELDSREVVKTYIRHGRAVAQYSSILAIVQRLR 100
K + S EER YD E +++ VV+ I +G + YS++L+I+ RLR
Sbjct: 510 SLIGLPPKTVETCYVELSPEERQLYDHMEGEAKGVVQNLINNGSLMRNYSTVLSIILRLR 569
Query: 99 ELCNDVASCTSEL---PKSVNIEDVSKNPELLQKL 4
+LC+D++ C EL S ++EDV+ PELLQKL
Sbjct: 570 QLCDDMSLCPPELRSFTTSTSVEDVTDKPELLQKL 604