BLASTX nr result

ID: Papaver23_contig00032022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00032022
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136968.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...   114   1e-23
ref|XP_002518730.1| ssm4 protein, putative [Ricinus communis] gi...   112   5e-23
ref|XP_002298731.1| predicted protein [Populus trichocarpa] gi|2...   108   5e-22
ref|NP_001119113.1| RING/U-box domain-containing protein [Arabid...   105   6e-21
ref|NP_195136.3| RING/U-box domain-containing protein [Arabidops...   105   6e-21

>ref|XP_004136968.1| PREDICTED: E3 ubiquitin-protein ligase MARCH6-like [Cucumis sativus]
            gi|449495626|ref|XP_004159898.1| PREDICTED: E3
            ubiquitin-protein ligase MARCH6-like [Cucumis sativus]
          Length = 1098

 Score =  114 bits (285), Expect = 1e-23
 Identities = 55/104 (52%), Positives = 71/104 (68%), Gaps = 1/104 (0%)
 Frame = -3

Query: 593  LWLLQEILIPFIRNLLLSLCFPYIFARWIVPSQTVNPKVNSTVYRFTWVACVTVVVLFSC 414
            LW+L+EI++P I  LL +LC PY+ AR + P       VNS VYRF W+ C+ V VL+ C
Sbjct: 967  LWVLREIVVPIIMKLLTALCVPYVLARGVFPVFGYPLIVNSAVYRFAWIGCLCVSVLYFC 1026

Query: 413  AKRFFGWITNLHNSIRDDRY-SGLGLQNFGEAAIERENEIGKLV 285
            AKRF  W TNLHNSIRDDRY  G  L NFGE + E++ ++G L+
Sbjct: 1027 AKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEDSEEKQIDVGTLL 1070


>ref|XP_002518730.1| ssm4 protein, putative [Ricinus communis]
           gi|223542111|gb|EEF43655.1| ssm4 protein, putative
           [Ricinus communis]
          Length = 214

 Score =  112 bits (280), Expect = 5e-23
 Identities = 57/101 (56%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
 Frame = -3

Query: 593 LWLLQEILIPFIRNLLLSLCFPYIFARWIVPSQTVNPKVNSTVYRFTWVACVTVVVLFSC 414
           LW+L+EI+ P I  LL +LC PY+ AR + P       VNS VYRF W+ C+   VL  C
Sbjct: 77  LWVLREIVFPIIMKLLTALCVPYVLARGVFPVLGYPLVVNSAVYRFAWLGCLCFSVLCFC 136

Query: 413 AKRFFGWITNLHNSIRDDRY-SGLGLQNFGEAAIERENEIG 294
           AKRF  W TNLHNSIRDDRY  G  L NFGE   ERENE G
Sbjct: 137 AKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEDKEERENEAG 177


>ref|XP_002298731.1| predicted protein [Populus trichocarpa] gi|222845989|gb|EEE83536.1|
            predicted protein [Populus trichocarpa]
          Length = 1054

 Score =  108 bits (271), Expect = 5e-22
 Identities = 54/101 (53%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
 Frame = -3

Query: 593  LWLLQEILIPFIRNLLLSLCFPYIFARWIVPSQTVNPKVNSTVYRFTWVACVTVVVLFSC 414
            LW+LQEI+ P I  LL +LC PY+ AR + P       VNS VYRF W+ C+   +L  C
Sbjct: 921  LWVLQEIVFPIIMKLLTALCVPYVLARGVFPVLGYPMAVNSAVYRFAWLGCLCFSLLCFC 980

Query: 413  AKRFFGWITNLHNSIRDDRY-SGLGLQNFGEAAIERENEIG 294
            AKRF  W TNLHNSIRDDRY  G  L N+GE   E +NE G
Sbjct: 981  AKRFHVWFTNLHNSIRDDRYLIGRKLHNYGEDLGEEQNEAG 1021


>ref|NP_001119113.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
            gi|332660924|gb|AEE86324.1| RING/U-box domain-containing
            protein [Arabidopsis thaliana]
          Length = 1107

 Score =  105 bits (262), Expect = 6e-21
 Identities = 50/99 (50%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
 Frame = -3

Query: 593  LWLLQEILIPFIRNLLLSLCFPYIFARWIVPSQTVNPKVNSTVYRFTWVACVTVVVLFSC 414
            LW+L+EI+ P +  LL +LC PY+ AR + P       VNS VYRF W+ C++V +   C
Sbjct: 976  LWVLREIVFPIVMKLLTALCVPYVLARGVFPMLGYPLVVNSAVYRFAWIGCLSVSLFCFC 1035

Query: 413  AKRFFGWITNLHNSIRDDRY-SGLGLQNFGEAAIERENE 300
            AKR   W  NLHNSIRDDRY  G  L NFGEAA+  +N+
Sbjct: 1036 AKRCHVWFRNLHNSIRDDRYLIGRRLHNFGEAALANQNQ 1074


>ref|NP_195136.3| RING/U-box domain-containing protein [Arabidopsis thaliana]
            gi|332660923|gb|AEE86323.1| RING/U-box domain-containing
            protein [Arabidopsis thaliana]
          Length = 1108

 Score =  105 bits (262), Expect = 6e-21
 Identities = 50/99 (50%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
 Frame = -3

Query: 593  LWLLQEILIPFIRNLLLSLCFPYIFARWIVPSQTVNPKVNSTVYRFTWVACVTVVVLFSC 414
            LW+L+EI+ P +  LL +LC PY+ AR + P       VNS VYRF W+ C++V +   C
Sbjct: 977  LWVLREIVFPIVMKLLTALCVPYVLARGVFPMLGYPLVVNSAVYRFAWIGCLSVSLFCFC 1036

Query: 413  AKRFFGWITNLHNSIRDDRY-SGLGLQNFGEAAIERENE 300
            AKR   W  NLHNSIRDDRY  G  L NFGEAA+  +N+
Sbjct: 1037 AKRCHVWFRNLHNSIRDDRYLIGRRLHNFGEAALANQNQ 1075


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